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Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation

Community assembly processes is the primary focus of community ecology. Using phylogenetic‐based and functional trait‐based methods jointly to explore these processes along environmental gradients are useful ways to explain the change of assembly mechanisms under changing world. Our study combined t...

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Autores principales: Xu, Jinshi, Chen, Yu, Zhang, Lixia, Chai, Yongfu, Wang, Mao, Guo, Yaoxin, Li, Ting, Yue, Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5528205/
https://www.ncbi.nlm.nih.gov/pubmed/28770046
http://dx.doi.org/10.1002/ece3.3068
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author Xu, Jinshi
Chen, Yu
Zhang, Lixia
Chai, Yongfu
Wang, Mao
Guo, Yaoxin
Li, Ting
Yue, Ming
author_facet Xu, Jinshi
Chen, Yu
Zhang, Lixia
Chai, Yongfu
Wang, Mao
Guo, Yaoxin
Li, Ting
Yue, Ming
author_sort Xu, Jinshi
collection PubMed
description Community assembly processes is the primary focus of community ecology. Using phylogenetic‐based and functional trait‐based methods jointly to explore these processes along environmental gradients are useful ways to explain the change of assembly mechanisms under changing world. Our study combined these methods to test assembly processes in wide range gradients of elevation and other habitat environmental factors. We collected our data at 40 plots in Taibai Mountain, China, with more than 2,300 m altitude difference in study area and then measured traits and environmental factors. Variance partitioning was used to distinguish the main environment factors leading to phylogeny and traits change among 40 plots. Principal component analysis (PCA) was applied to colligate other environment factors. Community assembly patterns along environmental gradients based on phylogenetic and functional methods were studied for exploring assembly mechanisms. Phylogenetic signal was calculated for each community along environmental gradients in order to detect the variation of trait performance on phylogeny. Elevation showed a better explanatory power than other environment factors for phylogenetic and most traits’ variance. Phylogenetic and several functional structure clustered at high elevation while some conserved traits overdispersed. Convergent tendency which might be caused by filtering or competition along elevation was detected based on functional traits. Leaf dry matter content (LDMC) and leaf nitrogen content along PCA 1 axis showed conflicting patterns comparing to patterns showed on elevation. LDMC exhibited the strongest phylogenetic signal. Only the phylogenetic signal of maximum plant height showed explicable change along environmental gradients. Synthesis. Elevation is the best environment factors for predicting phylogeny and traits change. Plant's phylogenetic and some functional structures show environmental filtering in alpine region while it shows different assembly processes in middle‐ and low‐altitude region by different trait/phylogeny. The results highlight deterministic processes dominate community assembly in large‐scale environmental gradients. Performance of phylogeny and traits along gradients may be independent with each other. The novel method for calculating functional structure which we used in this study and the focus of phylogenetic signal change along gradients may provide more useful ways to detect community assembly mechanisms.
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spelling pubmed-55282052017-08-02 Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation Xu, Jinshi Chen, Yu Zhang, Lixia Chai, Yongfu Wang, Mao Guo, Yaoxin Li, Ting Yue, Ming Ecol Evol Original Research Community assembly processes is the primary focus of community ecology. Using phylogenetic‐based and functional trait‐based methods jointly to explore these processes along environmental gradients are useful ways to explain the change of assembly mechanisms under changing world. Our study combined these methods to test assembly processes in wide range gradients of elevation and other habitat environmental factors. We collected our data at 40 plots in Taibai Mountain, China, with more than 2,300 m altitude difference in study area and then measured traits and environmental factors. Variance partitioning was used to distinguish the main environment factors leading to phylogeny and traits change among 40 plots. Principal component analysis (PCA) was applied to colligate other environment factors. Community assembly patterns along environmental gradients based on phylogenetic and functional methods were studied for exploring assembly mechanisms. Phylogenetic signal was calculated for each community along environmental gradients in order to detect the variation of trait performance on phylogeny. Elevation showed a better explanatory power than other environment factors for phylogenetic and most traits’ variance. Phylogenetic and several functional structure clustered at high elevation while some conserved traits overdispersed. Convergent tendency which might be caused by filtering or competition along elevation was detected based on functional traits. Leaf dry matter content (LDMC) and leaf nitrogen content along PCA 1 axis showed conflicting patterns comparing to patterns showed on elevation. LDMC exhibited the strongest phylogenetic signal. Only the phylogenetic signal of maximum plant height showed explicable change along environmental gradients. Synthesis. Elevation is the best environment factors for predicting phylogeny and traits change. Plant's phylogenetic and some functional structures show environmental filtering in alpine region while it shows different assembly processes in middle‐ and low‐altitude region by different trait/phylogeny. The results highlight deterministic processes dominate community assembly in large‐scale environmental gradients. Performance of phylogeny and traits along gradients may be independent with each other. The novel method for calculating functional structure which we used in this study and the focus of phylogenetic signal change along gradients may provide more useful ways to detect community assembly mechanisms. John Wiley and Sons Inc. 2017-06-02 /pmc/articles/PMC5528205/ /pubmed/28770046 http://dx.doi.org/10.1002/ece3.3068 Text en © 2017 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Xu, Jinshi
Chen, Yu
Zhang, Lixia
Chai, Yongfu
Wang, Mao
Guo, Yaoxin
Li, Ting
Yue, Ming
Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation
title Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation
title_full Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation
title_fullStr Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation
title_full_unstemmed Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation
title_short Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation
title_sort using phylogeny and functional traits for assessing community assembly along environmental gradients: a deterministic process driven by elevation
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5528205/
https://www.ncbi.nlm.nih.gov/pubmed/28770046
http://dx.doi.org/10.1002/ece3.3068
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