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“High-Throughput Characterization of Region-Specific Mitochondrial Function and Morphology”

The tissue-specific etiology of aging and stress has been elusive due to limitations in data processing of current techniques. Despite that many techniques are high-throughput, they usually use singular features of the data (e.g. whole fluorescence). One technology at the nexus of fluorescence-based...

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Autores principales: Daniele, Joseph R., Esping, Daniel J., Garcia, Gilbert, Parsons, Lee S., Arriaga, Edgar A., Dillin, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5532364/
https://www.ncbi.nlm.nih.gov/pubmed/28751733
http://dx.doi.org/10.1038/s41598-017-05152-z
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author Daniele, Joseph R.
Esping, Daniel J.
Garcia, Gilbert
Parsons, Lee S.
Arriaga, Edgar A.
Dillin, Andrew
author_facet Daniele, Joseph R.
Esping, Daniel J.
Garcia, Gilbert
Parsons, Lee S.
Arriaga, Edgar A.
Dillin, Andrew
author_sort Daniele, Joseph R.
collection PubMed
description The tissue-specific etiology of aging and stress has been elusive due to limitations in data processing of current techniques. Despite that many techniques are high-throughput, they usually use singular features of the data (e.g. whole fluorescence). One technology at the nexus of fluorescence-based screens is large particle flow cytometry (“biosorter”), capable of recording positional fluorescence and object granularity information from many individual live animals. Current processing of biosorter data, however, do not integrate positional information into their analysis and data visualization. Here, we present a bioanalytical platform for the quantification of positional information (“longitudinal profiling”) of C. elegans, which we posit embodies the benefits of both high-throughput screening and high-resolution microscopy. We show the use of these techniques in (1) characterizing distinct responses of a transcriptional reporter to various stresses in defined anatomical regions, (2) identifying regions of high mitochondrial membrane potential in live animals, (3) monitoring regional mitochondrial activity in aging models and during development, and (4) screening for regulators of muscle mitochondrial dynamics in a high-throughput format. This platform offers a significant improvement in the quality of high-throughput biosorter data analysis and visualization, opening new options for region-specific phenotypic screening of complex physiological phenomena and mitochondrial biology.
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spelling pubmed-55323642017-08-02 “High-Throughput Characterization of Region-Specific Mitochondrial Function and Morphology” Daniele, Joseph R. Esping, Daniel J. Garcia, Gilbert Parsons, Lee S. Arriaga, Edgar A. Dillin, Andrew Sci Rep Article The tissue-specific etiology of aging and stress has been elusive due to limitations in data processing of current techniques. Despite that many techniques are high-throughput, they usually use singular features of the data (e.g. whole fluorescence). One technology at the nexus of fluorescence-based screens is large particle flow cytometry (“biosorter”), capable of recording positional fluorescence and object granularity information from many individual live animals. Current processing of biosorter data, however, do not integrate positional information into their analysis and data visualization. Here, we present a bioanalytical platform for the quantification of positional information (“longitudinal profiling”) of C. elegans, which we posit embodies the benefits of both high-throughput screening and high-resolution microscopy. We show the use of these techniques in (1) characterizing distinct responses of a transcriptional reporter to various stresses in defined anatomical regions, (2) identifying regions of high mitochondrial membrane potential in live animals, (3) monitoring regional mitochondrial activity in aging models and during development, and (4) screening for regulators of muscle mitochondrial dynamics in a high-throughput format. This platform offers a significant improvement in the quality of high-throughput biosorter data analysis and visualization, opening new options for region-specific phenotypic screening of complex physiological phenomena and mitochondrial biology. Nature Publishing Group UK 2017-07-27 /pmc/articles/PMC5532364/ /pubmed/28751733 http://dx.doi.org/10.1038/s41598-017-05152-z Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Daniele, Joseph R.
Esping, Daniel J.
Garcia, Gilbert
Parsons, Lee S.
Arriaga, Edgar A.
Dillin, Andrew
“High-Throughput Characterization of Region-Specific Mitochondrial Function and Morphology”
title “High-Throughput Characterization of Region-Specific Mitochondrial Function and Morphology”
title_full “High-Throughput Characterization of Region-Specific Mitochondrial Function and Morphology”
title_fullStr “High-Throughput Characterization of Region-Specific Mitochondrial Function and Morphology”
title_full_unstemmed “High-Throughput Characterization of Region-Specific Mitochondrial Function and Morphology”
title_short “High-Throughput Characterization of Region-Specific Mitochondrial Function and Morphology”
title_sort “high-throughput characterization of region-specific mitochondrial function and morphology”
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5532364/
https://www.ncbi.nlm.nih.gov/pubmed/28751733
http://dx.doi.org/10.1038/s41598-017-05152-z
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