Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock

We report here the complete genome of a Dezidougou virus (DEZV) isolated from a passaged culture of the Zika virus strain DAK AR 41524. The consensus DEZV sequence we recovered shows 99% nucleotide similarity using BLASTN to a previously reported DEZV (accession no. JQ675604.1). The current sequence...

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Autores principales: Shrivastava, Susmita, Puri, Vinita, Fedorova, Nadia, Amedeo, Paolo, Stockwell, Timothy B., Shabman, Reed S., Rashid, Sujatha, Pickett, Brett E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2017
Materias:
Viruses
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5532823/
https://www.ncbi.nlm.nih.gov/pubmed/28751385
http://dx.doi.org/10.1128/genomeA.00605-17
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author Shrivastava, Susmita
Puri, Vinita
Fedorova, Nadia
Amedeo, Paolo
Stockwell, Timothy B.
Shabman, Reed S.
Rashid, Sujatha
Pickett, Brett E.
author_facet Shrivastava, Susmita
Puri, Vinita
Fedorova, Nadia
Amedeo, Paolo
Stockwell, Timothy B.
Shabman, Reed S.
Rashid, Sujatha
Pickett, Brett E.
author_sort Shrivastava, Susmita
collection PubMed
description We report here the complete genome of a Dezidougou virus (DEZV) isolated from a passaged culture of the Zika virus strain DAK AR 41524. The consensus DEZV sequence we recovered shows 99% nucleotide similarity using BLASTN to a previously reported DEZV (accession no. JQ675604.1). The current sequence has additional repeat regions as well as a deleted repeat region, which we confirmed by Sanger sequencing, that were not present in the originally published sequence, JQ675604.1.
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spelling pubmed-55328232017-08-03 Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock Shrivastava, Susmita Puri, Vinita Fedorova, Nadia Amedeo, Paolo Stockwell, Timothy B. Shabman, Reed S. Rashid, Sujatha Pickett, Brett E. Genome Announc Viruses We report here the complete genome of a Dezidougou virus (DEZV) isolated from a passaged culture of the Zika virus strain DAK AR 41524. The consensus DEZV sequence we recovered shows 99% nucleotide similarity using BLASTN to a previously reported DEZV (accession no. JQ675604.1). The current sequence has additional repeat regions as well as a deleted repeat region, which we confirmed by Sanger sequencing, that were not present in the originally published sequence, JQ675604.1. American Society for Microbiology 2017-07-27 /pmc/articles/PMC5532823/ /pubmed/28751385 http://dx.doi.org/10.1128/genomeA.00605-17 Text en Copyright © 2017 Shrivastava et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Viruses
Shrivastava, Susmita
Puri, Vinita
Fedorova, Nadia
Amedeo, Paolo
Stockwell, Timothy B.
Shabman, Reed S.
Rashid, Sujatha
Pickett, Brett E.
Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock
title Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock
title_full Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock
title_fullStr Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock
title_full_unstemmed Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock
title_short Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock
title_sort identification of dezidougou virus in a dak ar 41524 zika virus stock
topic Viruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5532823/
https://www.ncbi.nlm.nih.gov/pubmed/28751385
http://dx.doi.org/10.1128/genomeA.00605-17
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