Cargando…

Rhizospheric Microbiome Profiling of Capsicum annuum L. Cultivated in Amended Soils by 16S and Internal Transcribed Spacer 2 rRNA Amplicon Metagenome Sequencing

Rhizospheric microbiomes of Capsicum annuum L. cultivated either conventionally or amended with a synthetic microbial consortium or a root exudate inductor, were characterized by 16S/internal transcribed spacer 2 (ITS2) rRNA amplicon metagenome sequencing. The most abundant taxa found, although diff...

Descripción completa

Detalles Bibliográficos
Autores principales:	Asaff-Torres, Ali, Armendáriz-Ruiz, Mariana, Kirchmayr, Manuel, Rodríguez-Heredia, Raúl, Orozco, Marcos, Mateos-Díaz, Juan Carlos, Figueroa-Yáñez, Luis, Baqueiro-Peña, Itzamná, Verdín, Jorge
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2017
Materias:	Prokaryotes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5532826/ https://www.ncbi.nlm.nih.gov/pubmed/28751388 http://dx.doi.org/10.1128/genomeA.00626-17

Ejemplares similares

Response to Edaphoclimatic Conditions and Crop Management of the Bacterial Microbiome of Musa acuminata Rhizosphere Profiled by 16S rRNA Gene Amplicon Sequencing
por: De la Torre-González, Francisco J., et al.
Publicado: (2021)

Metataxonomics of Internal Transcribed Spacer amplicons in cerebrospinal fluid for diagnosing and genotyping of cryptococcal meningitis
por: Zhu, Ji-Ting, et al.
Publicado: (2019)

Functional regions in the 5′ external transcribed spacer of yeast pre-rRNA
por: Chen, Jing, et al.
Publicado: (2020)

Large-Scale Characterization of the Soil Microbiome in Ancient Tea Plantations Using High-Throughput 16S rRNA and Internal Transcribed Spacer Amplicon Sequencing
por: Kui, Ling, et al.
Publicado: (2021)

Rhizospheric Bacillus subtilis Exhibits Biocontrol Effect against Rhizoctonia solani in Pepper (Capsicum annuum)
por: Huang, Yuanyuan, et al.
Publicado: (2017)

Three Contributions to the Study of Capsicum Annuum
Publicado: (1887)

Internal Transcribed Spacer and 16S Amplicon Sequencing Identifies Microbial Species Associated with Asbestos in New Zealand
por: Doyle, Erin, et al.
Publicado: (2023)

The complete mitochondrial genome of the chiltepin pepper (Capsicum annuum var. glabriusculum), the wild progenitor of Capsicum annuum L.
por: Magdy, Mahmoud, et al.
Publicado: (2020)

Characterization of genetic diversity on tropical Trichoderma germplasm by sequencing of rRNA internal transcribed spacers
por: Feitosa, Yara Barros, et al.
Publicado: (2019)

Functional plasticity of Capsicum annuum var. glabriusculum through multiple traits
por: Jiménez-Leyva, Alberto, et al.
Publicado: (2022)

CloVR-ITS: Automated internal transcribed spacer amplicon sequence analysis pipeline for the characterization of fungal microbiota
por: White, James Robert, et al.
Publicado: (2013)

Employing 454 amplicon pyrosequencing to reveal intragenomic divergence in the internal transcribed spacer rDNA region in fungi
por: Lindner, Daniel L, et al.
Publicado: (2013)

Comparative Fungal Community Analyses Using Metatranscriptomics and Internal Transcribed Spacer Amplicon Sequencing from Norway Spruce
por: Schneider, Andreas N., et al.
Publicado: (2021)

Preliminary Analysis of Capsicum Annuum L. Extracts
por: CIULU-COSTINESCU, F., et al.
Publicado: (2015)

Detection of tandem repeats in the Capsicum annuum genome
por: Rudenko, Valentina, et al.
Publicado: (2023)

Equine Histoplasmosis in Ethiopia: Phylogenetic Analysis by Sequencing of the Internal Transcribed Spacer Region of rRNA Genes
por: Ameni, Gobena, et al.
Publicado: (2022)

New Insights into Capsicum spp Relatedness and the Diversification Process of Capsicum annuum in Spain
por: González-Pérez, Susana, et al.
Publicado: (2014)

Identification of Escherichia coli through analysis of 16S rRNA and 16S-23S rRNA internal transcribed spacer region sequences
por: Magray, Mohammed Siraj Ud Din, et al.
Publicado: (2011)

Whole-Genome Sequence of Pseudomonas frederiksbergensis Strain A6, Isolated from the Rhizosphere of Pepper (Capsicum annuum L.)
por: Bashizi, Tino, et al.
Publicado: (2023)

16S rRNA Gene Amplicon Sequencing Data for Pteris vittata Rhizosphere Soils
por: Mu’azu, Aminu Salisu, et al.
Publicado: (2023)

Modification of Adenosine196 by Mettl3 Methyltransferase in the 5’-External Transcribed Spacer of 47S Pre-rRNA Affects rRNA Maturation
por: Sergeeva, Olga, et al.
Publicado: (2020)

Characterization of Microcystis (Cyanobacteria) Genotypes Based on the Internal Transcribed Spacer Region of rRNA by Next-Generation Sequencing
por: Huo, Da, et al.
Publicado: (2018)

Stress inducible proteinase inhibitor diversity in Capsicum annuum
por: Mishra, Manasi, et al.
Publicado: (2012)

Database of Potential Promoter Sequences in the Capsicum annuum Genome
por: Rudenko, Valentina, et al.
Publicado: (2022)

Viromes of 15 Pepper (Capsicum annuum L.) Cultivars
por: Jo, Yeonhwa, et al.
Publicado: (2022)

Customization of a DADA2-based pipeline for fungal internal transcribed spacer 1 (ITS1) amplicon data sets
por: Rolling, Thierry, et al.
Publicado: (2022)

Transcriptomic Analysis Reveals the Response Mechanisms of Bell Pepper (Capsicum annuum) to Phosphorus Deficiency
por: Salazar-Gutiérrez, Daizha, et al.
Publicado: (2023)

In silico identification of Capsicum type III polyketide synthase genes and expression patterns in Capsicum annuum
por: Kan, Delong, et al.
Publicado: (2020)

A single test approach for accurate and sensitive detection and taxonomic characterization of Trypanosomes by comprehensive analysis of internal transcribed spacer 1 amplicons
por: Gaithuma, Alex Kiarie, et al.
Publicado: (2019)

Microbiomes of Field-Grown Maize and Soybean in Southeastern and Central Brazil Inferred by High-Throughput 16S and Internal Transcribed Spacer Amplicon Sequencing
por: Rossmann, Maike, et al.
Publicado: (2021)

New insights into the cellular responses to iron nanoparticles in Capsicum annuum
por: Yuan, Junxia, et al.
Publicado: (2018)

Effects of Chlorella extracts on growth of Capsicum annuum L. seedlings
por: Tian, Shi-Lin, et al.
Publicado: (2022)

Capsicum annuum with causal allele of hybrid weakness is prevalent in Asia
por: Shiragaki, Kumpei, et al.
Publicado: (2022)

Comparative Quantitative Study on Phytochemical Contents and Antioxidant Activities of Capsicum annuum L. and Capsicum frutescens L.
por: Olatunji, Tomi Lois, et al.
Publicado: (2019)

Secondary Structure Analyses of the Nuclear rRNA Internal Transcribed Spacers and Assessment of Its Phylogenetic Utility across the Brassicaceae (Mustards)
por: Edger, Patrick P., et al.
Publicado: (2014)

Metagenomic data of fungal internal transcribed Spacer and 18S rRNA gene sequences from Lonar lake sediment, India
por: Dudhagara, Pravin, et al.
Publicado: (2015)

Bioprospection of Basidiomycetes and molecular phylogenetic analysis using internal transcribed spacer (ITS) and 5.8S rRNA gene sequence
por: Mowna Sundari, Thangamalai, et al.
Publicado: (2018)

Antibacterial activity of jalapeño pepper (Capsicum annuum var. annuum) extract fractions against select foodborne pathogens
por: Bacon, Karleigh, et al.
Publicado: (2017)

Rhizospheric Bacillus amyloliquefaciens Protects Capsicum annuum cv. Geumsugangsan From Multiple Abiotic Stresses via Multifarious Plant Growth-Promoting Attributes
por: Kazerooni, Elham Ahmed, et al.
Publicado: (2021)

Analysis of Mammalian rDNA Internal Transcribed Spacers
por: Coleman, Annette W.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_k260s21bi3akr0u55ojoprhjf7