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DNA Self-assembly Catalyzed by Artificial Agents

Nucleic acids have been shown to be versatile molecules and engineered to produce various nanostructures. However, the poor rate of these uncatalyzed nucleic acid reactions has restricted the development and applications. Herein, we reported a novel finding that DNA self-assembly could be nonenzymat...

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Autores principales: Shi, Chao, Wang, Yifan, Zhang, Menghua, Ma, Cuiping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5533707/
https://www.ncbi.nlm.nih.gov/pubmed/28754968
http://dx.doi.org/10.1038/s41598-017-07210-y
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author Shi, Chao
Wang, Yifan
Zhang, Menghua
Ma, Cuiping
author_facet Shi, Chao
Wang, Yifan
Zhang, Menghua
Ma, Cuiping
author_sort Shi, Chao
collection PubMed
description Nucleic acids have been shown to be versatile molecules and engineered to produce various nanostructures. However, the poor rate of these uncatalyzed nucleic acid reactions has restricted the development and applications. Herein, we reported a novel finding that DNA self-assembly could be nonenzymatically catalyzed by artificial agents with an increasing dissociation rate constant K2. The catalytic role of several artificial agents in DNA self-assembly was verified by real-time fluorescent detection or agarose gel electrophoresis. We found that 20% PEG 200 could significantly catalyze DNA self-assembly and increase the reaction efficiency, such as linear hybridization chain reaction (HCR) and exponential hairpin assembly (EHA). Therefore, we foresee that a fast and efficient DNA self-assembly in structural DNA nanotechnology will be desirable.
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spelling pubmed-55337072017-08-03 DNA Self-assembly Catalyzed by Artificial Agents Shi, Chao Wang, Yifan Zhang, Menghua Ma, Cuiping Sci Rep Article Nucleic acids have been shown to be versatile molecules and engineered to produce various nanostructures. However, the poor rate of these uncatalyzed nucleic acid reactions has restricted the development and applications. Herein, we reported a novel finding that DNA self-assembly could be nonenzymatically catalyzed by artificial agents with an increasing dissociation rate constant K2. The catalytic role of several artificial agents in DNA self-assembly was verified by real-time fluorescent detection or agarose gel electrophoresis. We found that 20% PEG 200 could significantly catalyze DNA self-assembly and increase the reaction efficiency, such as linear hybridization chain reaction (HCR) and exponential hairpin assembly (EHA). Therefore, we foresee that a fast and efficient DNA self-assembly in structural DNA nanotechnology will be desirable. Nature Publishing Group UK 2017-07-28 /pmc/articles/PMC5533707/ /pubmed/28754968 http://dx.doi.org/10.1038/s41598-017-07210-y Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Shi, Chao
Wang, Yifan
Zhang, Menghua
Ma, Cuiping
DNA Self-assembly Catalyzed by Artificial Agents
title DNA Self-assembly Catalyzed by Artificial Agents
title_full DNA Self-assembly Catalyzed by Artificial Agents
title_fullStr DNA Self-assembly Catalyzed by Artificial Agents
title_full_unstemmed DNA Self-assembly Catalyzed by Artificial Agents
title_short DNA Self-assembly Catalyzed by Artificial Agents
title_sort dna self-assembly catalyzed by artificial agents
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5533707/
https://www.ncbi.nlm.nih.gov/pubmed/28754968
http://dx.doi.org/10.1038/s41598-017-07210-y
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