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Fully Automated Deep Learning System for Bone Age Assessment

Skeletal maturity progresses through discrete phases, a fact that is used routinely in pediatrics where bone age assessments (BAAs) are compared to chronological age in the evaluation of endocrine and metabolic disorders. While central to many disease evaluations, little has changed to improve the t...

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Autores principales: Lee, Hyunkwang, Tajmir, Shahein, Lee, Jenny, Zissen, Maurice, Yeshiwas, Bethel Ayele, Alkasab, Tarik K., Choy, Garry, Do, Synho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5537090/
https://www.ncbi.nlm.nih.gov/pubmed/28275919
http://dx.doi.org/10.1007/s10278-017-9955-8
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author Lee, Hyunkwang
Tajmir, Shahein
Lee, Jenny
Zissen, Maurice
Yeshiwas, Bethel Ayele
Alkasab, Tarik K.
Choy, Garry
Do, Synho
author_facet Lee, Hyunkwang
Tajmir, Shahein
Lee, Jenny
Zissen, Maurice
Yeshiwas, Bethel Ayele
Alkasab, Tarik K.
Choy, Garry
Do, Synho
author_sort Lee, Hyunkwang
collection PubMed
description Skeletal maturity progresses through discrete phases, a fact that is used routinely in pediatrics where bone age assessments (BAAs) are compared to chronological age in the evaluation of endocrine and metabolic disorders. While central to many disease evaluations, little has changed to improve the tedious process since its introduction in 1950. In this study, we propose a fully automated deep learning pipeline to segment a region of interest, standardize and preprocess input radiographs, and perform BAA. Our models use an ImageNet pretrained, fine-tuned convolutional neural network (CNN) to achieve 57.32 and 61.40% accuracies for the female and male cohorts on our held-out test images. Female test radiographs were assigned a BAA within 1 year 90.39% and within 2 years 98.11% of the time. Male test radiographs were assigned 94.18% within 1 year and 99.00% within 2 years. Using the input occlusion method, attention maps were created which reveal what features the trained model uses to perform BAA. These correspond to what human experts look at when manually performing BAA. Finally, the fully automated BAA system was deployed in the clinical environment as a decision supporting system for more accurate and efficient BAAs at much faster interpretation time (<2 s) than the conventional method.
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spelling pubmed-55370902017-08-15 Fully Automated Deep Learning System for Bone Age Assessment Lee, Hyunkwang Tajmir, Shahein Lee, Jenny Zissen, Maurice Yeshiwas, Bethel Ayele Alkasab, Tarik K. Choy, Garry Do, Synho J Digit Imaging Article Skeletal maturity progresses through discrete phases, a fact that is used routinely in pediatrics where bone age assessments (BAAs) are compared to chronological age in the evaluation of endocrine and metabolic disorders. While central to many disease evaluations, little has changed to improve the tedious process since its introduction in 1950. In this study, we propose a fully automated deep learning pipeline to segment a region of interest, standardize and preprocess input radiographs, and perform BAA. Our models use an ImageNet pretrained, fine-tuned convolutional neural network (CNN) to achieve 57.32 and 61.40% accuracies for the female and male cohorts on our held-out test images. Female test radiographs were assigned a BAA within 1 year 90.39% and within 2 years 98.11% of the time. Male test radiographs were assigned 94.18% within 1 year and 99.00% within 2 years. Using the input occlusion method, attention maps were created which reveal what features the trained model uses to perform BAA. These correspond to what human experts look at when manually performing BAA. Finally, the fully automated BAA system was deployed in the clinical environment as a decision supporting system for more accurate and efficient BAAs at much faster interpretation time (<2 s) than the conventional method. Springer International Publishing 2017-03-08 2017-08 /pmc/articles/PMC5537090/ /pubmed/28275919 http://dx.doi.org/10.1007/s10278-017-9955-8 Text en © The Author(s) 2017 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Lee, Hyunkwang
Tajmir, Shahein
Lee, Jenny
Zissen, Maurice
Yeshiwas, Bethel Ayele
Alkasab, Tarik K.
Choy, Garry
Do, Synho
Fully Automated Deep Learning System for Bone Age Assessment
title Fully Automated Deep Learning System for Bone Age Assessment
title_full Fully Automated Deep Learning System for Bone Age Assessment
title_fullStr Fully Automated Deep Learning System for Bone Age Assessment
title_full_unstemmed Fully Automated Deep Learning System for Bone Age Assessment
title_short Fully Automated Deep Learning System for Bone Age Assessment
title_sort fully automated deep learning system for bone age assessment
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5537090/
https://www.ncbi.nlm.nih.gov/pubmed/28275919
http://dx.doi.org/10.1007/s10278-017-9955-8
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