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Fully Automated Deep Learning System for Bone Age Assessment
Skeletal maturity progresses through discrete phases, a fact that is used routinely in pediatrics where bone age assessments (BAAs) are compared to chronological age in the evaluation of endocrine and metabolic disorders. While central to many disease evaluations, little has changed to improve the t...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5537090/ https://www.ncbi.nlm.nih.gov/pubmed/28275919 http://dx.doi.org/10.1007/s10278-017-9955-8 |
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author | Lee, Hyunkwang Tajmir, Shahein Lee, Jenny Zissen, Maurice Yeshiwas, Bethel Ayele Alkasab, Tarik K. Choy, Garry Do, Synho |
author_facet | Lee, Hyunkwang Tajmir, Shahein Lee, Jenny Zissen, Maurice Yeshiwas, Bethel Ayele Alkasab, Tarik K. Choy, Garry Do, Synho |
author_sort | Lee, Hyunkwang |
collection | PubMed |
description | Skeletal maturity progresses through discrete phases, a fact that is used routinely in pediatrics where bone age assessments (BAAs) are compared to chronological age in the evaluation of endocrine and metabolic disorders. While central to many disease evaluations, little has changed to improve the tedious process since its introduction in 1950. In this study, we propose a fully automated deep learning pipeline to segment a region of interest, standardize and preprocess input radiographs, and perform BAA. Our models use an ImageNet pretrained, fine-tuned convolutional neural network (CNN) to achieve 57.32 and 61.40% accuracies for the female and male cohorts on our held-out test images. Female test radiographs were assigned a BAA within 1 year 90.39% and within 2 years 98.11% of the time. Male test radiographs were assigned 94.18% within 1 year and 99.00% within 2 years. Using the input occlusion method, attention maps were created which reveal what features the trained model uses to perform BAA. These correspond to what human experts look at when manually performing BAA. Finally, the fully automated BAA system was deployed in the clinical environment as a decision supporting system for more accurate and efficient BAAs at much faster interpretation time (<2 s) than the conventional method. |
format | Online Article Text |
id | pubmed-5537090 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-55370902017-08-15 Fully Automated Deep Learning System for Bone Age Assessment Lee, Hyunkwang Tajmir, Shahein Lee, Jenny Zissen, Maurice Yeshiwas, Bethel Ayele Alkasab, Tarik K. Choy, Garry Do, Synho J Digit Imaging Article Skeletal maturity progresses through discrete phases, a fact that is used routinely in pediatrics where bone age assessments (BAAs) are compared to chronological age in the evaluation of endocrine and metabolic disorders. While central to many disease evaluations, little has changed to improve the tedious process since its introduction in 1950. In this study, we propose a fully automated deep learning pipeline to segment a region of interest, standardize and preprocess input radiographs, and perform BAA. Our models use an ImageNet pretrained, fine-tuned convolutional neural network (CNN) to achieve 57.32 and 61.40% accuracies for the female and male cohorts on our held-out test images. Female test radiographs were assigned a BAA within 1 year 90.39% and within 2 years 98.11% of the time. Male test radiographs were assigned 94.18% within 1 year and 99.00% within 2 years. Using the input occlusion method, attention maps were created which reveal what features the trained model uses to perform BAA. These correspond to what human experts look at when manually performing BAA. Finally, the fully automated BAA system was deployed in the clinical environment as a decision supporting system for more accurate and efficient BAAs at much faster interpretation time (<2 s) than the conventional method. Springer International Publishing 2017-03-08 2017-08 /pmc/articles/PMC5537090/ /pubmed/28275919 http://dx.doi.org/10.1007/s10278-017-9955-8 Text en © The Author(s) 2017 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Lee, Hyunkwang Tajmir, Shahein Lee, Jenny Zissen, Maurice Yeshiwas, Bethel Ayele Alkasab, Tarik K. Choy, Garry Do, Synho Fully Automated Deep Learning System for Bone Age Assessment |
title | Fully Automated Deep Learning System for Bone Age Assessment |
title_full | Fully Automated Deep Learning System for Bone Age Assessment |
title_fullStr | Fully Automated Deep Learning System for Bone Age Assessment |
title_full_unstemmed | Fully Automated Deep Learning System for Bone Age Assessment |
title_short | Fully Automated Deep Learning System for Bone Age Assessment |
title_sort | fully automated deep learning system for bone age assessment |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5537090/ https://www.ncbi.nlm.nih.gov/pubmed/28275919 http://dx.doi.org/10.1007/s10278-017-9955-8 |
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