Cargando…

Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h)

Ascoviruses are double-stranded DNA viruses that mainly infect noctuid larvae, and are transmitted by the parasitoid wasp Microplitis similis Lyle. Ascovirus-parasitoids wasp-noctuid insects constitute the dissemination system. Selection of suitable reference genes for the dissemination system could...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Zi-Shu, Han, Ning-Ning, Li, Jian-Hong, Huang, Guo-Hua, Wan, Hu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5539149/
https://www.ncbi.nlm.nih.gov/pubmed/28765578
http://dx.doi.org/10.1038/s41598-017-07684-w
_version_ 1783254428595257344
author Chen, Zi-Shu
Han, Ning-Ning
Li, Jian-Hong
Huang, Guo-Hua
Wan, Hu
author_facet Chen, Zi-Shu
Han, Ning-Ning
Li, Jian-Hong
Huang, Guo-Hua
Wan, Hu
author_sort Chen, Zi-Shu
collection PubMed
description Ascoviruses are double-stranded DNA viruses that mainly infect noctuid larvae, and are transmitted by the parasitoid wasp Microplitis similis Lyle. Ascovirus-parasitoids wasp-noctuid insects constitute the dissemination system. Selection of suitable reference genes for the dissemination system could play an important role in elucidating the pathogenic molecular mechanisms of ascovirus. Unfortunately, such studies on potential reference genes in the dissemination system of ascoviruses are lacking. In the present study, we evaluated 11 candidate reference genes: β-actin1 (ACT1), β-actin2 (ACT2), elongation factor 1 (EF1), elongation factor 2 (EF2), ribosomal protein L10 (L10), ribosomal protein L17A (L17A), superoxide dismutase (SOD), 28S ribosome (28S), Tubulin (TUB) and 18S ribosome (18S). The samples were originally from various virus concentrations and points-in-time of experimental treatments using RefFinder and four algorithms. The results showed that EF1 was the most stable internal gene in S. exigua and M. similis and that EF2 was the most stable in the IOZCAS-Spex-II-A cell line, and the stability of reference genes were confirmed via the expression levels of two inhibitor of apoptosis-like (iap-like) genes from Heliothis virescens ascovirus 3 h (HvAV-3h). This study provides a crucial basis for future research that explores the molecular mechanisms of the pathogenesis of ascoviruses.
format Online
Article
Text
id pubmed-5539149
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-55391492017-08-07 Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h) Chen, Zi-Shu Han, Ning-Ning Li, Jian-Hong Huang, Guo-Hua Wan, Hu Sci Rep Article Ascoviruses are double-stranded DNA viruses that mainly infect noctuid larvae, and are transmitted by the parasitoid wasp Microplitis similis Lyle. Ascovirus-parasitoids wasp-noctuid insects constitute the dissemination system. Selection of suitable reference genes for the dissemination system could play an important role in elucidating the pathogenic molecular mechanisms of ascovirus. Unfortunately, such studies on potential reference genes in the dissemination system of ascoviruses are lacking. In the present study, we evaluated 11 candidate reference genes: β-actin1 (ACT1), β-actin2 (ACT2), elongation factor 1 (EF1), elongation factor 2 (EF2), ribosomal protein L10 (L10), ribosomal protein L17A (L17A), superoxide dismutase (SOD), 28S ribosome (28S), Tubulin (TUB) and 18S ribosome (18S). The samples were originally from various virus concentrations and points-in-time of experimental treatments using RefFinder and four algorithms. The results showed that EF1 was the most stable internal gene in S. exigua and M. similis and that EF2 was the most stable in the IOZCAS-Spex-II-A cell line, and the stability of reference genes were confirmed via the expression levels of two inhibitor of apoptosis-like (iap-like) genes from Heliothis virescens ascovirus 3 h (HvAV-3h). This study provides a crucial basis for future research that explores the molecular mechanisms of the pathogenesis of ascoviruses. Nature Publishing Group UK 2017-08-01 /pmc/articles/PMC5539149/ /pubmed/28765578 http://dx.doi.org/10.1038/s41598-017-07684-w Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Chen, Zi-Shu
Han, Ning-Ning
Li, Jian-Hong
Huang, Guo-Hua
Wan, Hu
Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h)
title Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h)
title_full Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h)
title_fullStr Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h)
title_full_unstemmed Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h)
title_short Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h)
title_sort selection of reference genes for expression analysis using rt-qpcr in the dissemination system of heliothis virescens ascovirus 3 h (hvav-3h)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5539149/
https://www.ncbi.nlm.nih.gov/pubmed/28765578
http://dx.doi.org/10.1038/s41598-017-07684-w
work_keys_str_mv AT chenzishu selectionofreferencegenesforexpressionanalysisusingrtqpcrinthedisseminationsystemofheliothisvirescensascovirus3hhvav3h
AT hanningning selectionofreferencegenesforexpressionanalysisusingrtqpcrinthedisseminationsystemofheliothisvirescensascovirus3hhvav3h
AT lijianhong selectionofreferencegenesforexpressionanalysisusingrtqpcrinthedisseminationsystemofheliothisvirescensascovirus3hhvav3h
AT huangguohua selectionofreferencegenesforexpressionanalysisusingrtqpcrinthedisseminationsystemofheliothisvirescensascovirus3hhvav3h
AT wanhu selectionofreferencegenesforexpressionanalysisusingrtqpcrinthedisseminationsystemofheliothisvirescensascovirus3hhvav3h