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Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood: An Interlaboratory Ring Test
[Image: see text] Lipoprotein profiling of human blood by (1)H nuclear magnetic resonance (NMR) spectroscopy is a rapid and promising approach to monitor health and disease states in medicine and nutrition. However, lack of standardization of measurement protocols has prevented the use of NMR-based...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical
Society
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5541326/ https://www.ncbi.nlm.nih.gov/pubmed/28692288 http://dx.doi.org/10.1021/acs.analchem.7b01329 |
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author | Monsonis Centelles, Sandra Hoefsloot, Huub C. J. Khakimov, Bekzod Ebrahimi, Parvaneh Lind, Mads V. Kristensen, Mette de Roo, Niels Jacobs, Doris M. van Duynhoven, John Cannet, Claire Fang, Fang Humpfer, Eberhard Schäfer, Hartmut Spraul, Manfred Engelsen, Søren B. Smilde, Age K. |
author_facet | Monsonis Centelles, Sandra Hoefsloot, Huub C. J. Khakimov, Bekzod Ebrahimi, Parvaneh Lind, Mads V. Kristensen, Mette de Roo, Niels Jacobs, Doris M. van Duynhoven, John Cannet, Claire Fang, Fang Humpfer, Eberhard Schäfer, Hartmut Spraul, Manfred Engelsen, Søren B. Smilde, Age K. |
author_sort | Monsonis Centelles, Sandra |
collection | PubMed |
description | [Image: see text] Lipoprotein profiling of human blood by (1)H nuclear magnetic resonance (NMR) spectroscopy is a rapid and promising approach to monitor health and disease states in medicine and nutrition. However, lack of standardization of measurement protocols has prevented the use of NMR-based lipoprotein profiling in metastudies. In this study, a standardized NMR measurement protocol was applied in a ring test performed across three different laboratories in Europe on plasma and serum samples from 28 individuals. Data was evaluated in terms of (i) spectral differences, (ii) differences in LPD predictions obtained using an existing prediction model, and (iii) agreement of predictions with cholesterol concentrations in high- and low-density lipoproteins (HDL and LDL) particles measured by standardized clinical assays. ANOVA-simultaneous component analysis (ASCA) of the ring test spectral ensemble that contains methylene and methyl peaks (1.4–0.6 ppm) showed that 97.99% of the variance in the data is related to subject, 1.62% to sample type (serum or plasma), and 0.39% to laboratory. This interlaboratory variation is in fact smaller than the maximum acceptable intralaboratory variation on quality control samples. It is also shown that the reproducibility between laboratories is good enough for the LPD predictions to be exchangeable when the standardized NMR measurement protocol is followed. With the successful implementation of this protocol, which results in reproducible prediction of lipoprotein distributions across laboratories, a step is taken toward bringing NMR more into scope of prognostic and diagnostic biomarkers, reducing the need for less efficient methods such as ultracentrifugation or high-performance liquid chromatography (HPLC). |
format | Online Article Text |
id | pubmed-5541326 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | American
Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-55413262017-08-04 Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood: An Interlaboratory Ring Test Monsonis Centelles, Sandra Hoefsloot, Huub C. J. Khakimov, Bekzod Ebrahimi, Parvaneh Lind, Mads V. Kristensen, Mette de Roo, Niels Jacobs, Doris M. van Duynhoven, John Cannet, Claire Fang, Fang Humpfer, Eberhard Schäfer, Hartmut Spraul, Manfred Engelsen, Søren B. Smilde, Age K. Anal Chem [Image: see text] Lipoprotein profiling of human blood by (1)H nuclear magnetic resonance (NMR) spectroscopy is a rapid and promising approach to monitor health and disease states in medicine and nutrition. However, lack of standardization of measurement protocols has prevented the use of NMR-based lipoprotein profiling in metastudies. In this study, a standardized NMR measurement protocol was applied in a ring test performed across three different laboratories in Europe on plasma and serum samples from 28 individuals. Data was evaluated in terms of (i) spectral differences, (ii) differences in LPD predictions obtained using an existing prediction model, and (iii) agreement of predictions with cholesterol concentrations in high- and low-density lipoproteins (HDL and LDL) particles measured by standardized clinical assays. ANOVA-simultaneous component analysis (ASCA) of the ring test spectral ensemble that contains methylene and methyl peaks (1.4–0.6 ppm) showed that 97.99% of the variance in the data is related to subject, 1.62% to sample type (serum or plasma), and 0.39% to laboratory. This interlaboratory variation is in fact smaller than the maximum acceptable intralaboratory variation on quality control samples. It is also shown that the reproducibility between laboratories is good enough for the LPD predictions to be exchangeable when the standardized NMR measurement protocol is followed. With the successful implementation of this protocol, which results in reproducible prediction of lipoprotein distributions across laboratories, a step is taken toward bringing NMR more into scope of prognostic and diagnostic biomarkers, reducing the need for less efficient methods such as ultracentrifugation or high-performance liquid chromatography (HPLC). American Chemical Society 2017-07-10 2017-08-01 /pmc/articles/PMC5541326/ /pubmed/28692288 http://dx.doi.org/10.1021/acs.analchem.7b01329 Text en Copyright © 2017 American Chemical Society This is an open access article published under a Creative Commons Non-Commercial No Derivative Works (CC-BY-NC-ND) Attribution License (http://pubs.acs.org/page/policy/authorchoice_ccbyncnd_termsofuse.html) , which permits copying and redistribution of the article, and creation of adaptations, all for non-commercial purposes. |
spellingShingle | Monsonis Centelles, Sandra Hoefsloot, Huub C. J. Khakimov, Bekzod Ebrahimi, Parvaneh Lind, Mads V. Kristensen, Mette de Roo, Niels Jacobs, Doris M. van Duynhoven, John Cannet, Claire Fang, Fang Humpfer, Eberhard Schäfer, Hartmut Spraul, Manfred Engelsen, Søren B. Smilde, Age K. Toward Reliable Lipoprotein Particle Predictions from NMR Spectra of Human Blood: An Interlaboratory Ring Test |
title | Toward Reliable
Lipoprotein Particle Predictions from
NMR Spectra of Human Blood: An Interlaboratory Ring Test |
title_full | Toward Reliable
Lipoprotein Particle Predictions from
NMR Spectra of Human Blood: An Interlaboratory Ring Test |
title_fullStr | Toward Reliable
Lipoprotein Particle Predictions from
NMR Spectra of Human Blood: An Interlaboratory Ring Test |
title_full_unstemmed | Toward Reliable
Lipoprotein Particle Predictions from
NMR Spectra of Human Blood: An Interlaboratory Ring Test |
title_short | Toward Reliable
Lipoprotein Particle Predictions from
NMR Spectra of Human Blood: An Interlaboratory Ring Test |
title_sort | toward reliable
lipoprotein particle predictions from
nmr spectra of human blood: an interlaboratory ring test |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5541326/ https://www.ncbi.nlm.nih.gov/pubmed/28692288 http://dx.doi.org/10.1021/acs.analchem.7b01329 |
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