Cargando…

Identifying hybridization and admixture using SNPs: application of the DArTseq platform in phylogeographic research on vertebrates

Next-generation sequencing (NGS) approaches are increasingly being used to generate multi-locus data for phylogeographic and evolutionary genetics research. We detail the applicability of a restriction enzyme-mediated genome complexity reduction approach with subsequent NGS (DArTseq) in vertebrate s...

Descripción completa

Detalles Bibliográficos
Autores principales:	Melville, Jane, Haines, Margaret L., Boysen, Katja, Hodkinson, Luke, Kilian, Andrzej, Smith Date, Katie L., Potvin, Dominique A., Parris, Kirsten M.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	The Royal Society Publishing 2017
Materias:	Genetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5541528/ https://www.ncbi.nlm.nih.gov/pubmed/28791133 http://dx.doi.org/10.1098/rsos.161061

Ejemplares similares

Ultra-high-throughput DArTseq-based silicoDArT and SNP markers for genomic studies in macadamia
por: Alam, Mobashwer, et al.
Publicado: (2018)

QTL mapping for fruit quality in Citrus using DArTseq markers
por: Curtolo, Maiara, et al.
Publicado: (2017)

DArTseq-based analysis of genomic relationships among species of tribe Triticeae
por: Edet, Offiong U., et al.
Publicado: (2018)

Identification by the DArTseq method of the genetic origin of the Coffea canephora cultivated in Vietnam and Mexico
por: Garavito, Andrea, et al.
Publicado: (2016)

Genomic selection to resistance to Stenocarpella maydis in maize lines using DArTseq markers
por: dos Santos, Jhonathan Pedroso Rigal, et al.
Publicado: (2016)

Uncovering Phenotypic Diversity and DArTseq Marker Loci Associated with Antioxidant Activity in Common Bean
por: Nadeem, Muhammad Azhar, et al.
Publicado: (2019)

Genetic diversity of local and introduced cassava germplasm in Burundi using DArTseq molecular analyses
por: Pierre, Niyonzima, et al.
Publicado: (2022)

The Use of DArTseq Technology to Identify Markers Related to the Heterosis Effects in Selected Traits in Maize
por: Bocianowski, Jan, et al.
Publicado: (2023)

Genetic Analysis of High Protein Content in ‘AC Proteus’ Related Soybean Populations Using SSR, SNP, DArT and DArTseq Markers
por: Samanfar, Bahram, et al.
Publicado: (2019)

Identifying suitable tester for evaluating Striga resistant lines using DArTseq markers and agronomic traits
por: Zebire, Degife, et al.
Publicado: (2021)

Genome-wide association analysis of chickpea germplasms differing for salinity tolerance based on DArTseq markers
por: Ahmed, Shaimaa Mahmoud, et al.
Publicado: (2021)

Genetic diversity and population structure of Uganda’s yam (Dioscorea spp.) genetic resource based on DArTseq
por: Amponsah Adjei, Emmanuel, et al.
Publicado: (2023)

DArTseq-Based High-Throughput SilicoDArT and SNP Markers Applied for Association Mapping of Genes Related to Maize Morphology
por: Tomkowiak, Agnieszka, et al.
Publicado: (2021)

The Use of DArTseq Technology to Identify New SNP and SilicoDArT Markers Related to the Yield-Related Traits Components in Maize
por: Tomkowiak, Agnieszka, et al.
Publicado: (2022)

Genetic Variation and Population Structure of Oryza glaberrima and Development of a Mini-Core Collection Using DArTseq
por: Ndjiondjop, Marie-Noelle, et al.
Publicado: (2017)

Genome-Wide Genetic Diversity and Population Structure of Tunisian Durum Wheat Landraces Based on DArTseq Technology
por: Robbana, Cyrine, et al.
Publicado: (2019)

The Use of DArTseq Technology to Identify Markers Linked to Genes Responsible for Seed Germination and Seed Vigor in Maize
por: Nowak, Bartosz, et al.
Publicado: (2022)

A High-Density Integrated DArTseq SNP-Based Genetic Map of Pisum fulvum and Identification of QTLs Controlling Rust Resistance
por: Barilli, Eleonora, et al.
Publicado: (2018)

Assessment of Genetic Diversity and Structure of Large Garlic (Allium sativum) Germplasm Bank, by Diversity Arrays Technology “Genotyping-by-Sequencing” Platform (DArTseq)
por: Egea, Leticia A., et al.
Publicado: (2017)

Genetic Diversity and Population Structure of Myanmar Rice (Oryza sativa L.) Varieties Using DArTseq-Based SNP and SilicoDArT Markers
por: Thant, Aye Aye, et al.
Publicado: (2021)

Characterization of genetic diversity in Turkish common bean gene pool using phenotypic and whole-genome DArTseq-generated silicoDArT marker information
por: Nadeem, Muhammad Azhar, et al.
Publicado: (2018)

A Whole Genome DArTseq and SNP Analysis for Genetic Diversity Assessment in Durum Wheat from Central Fertile Crescent
por: Baloch, Faheem Shehzad, et al.
Publicado: (2017)

Characterizing Palestinian snake melon (Cucumis melo var. flexuosus) germplasm diversity and structure using SNP and DArTseq markers
por: Abu Zaitoun, Salam Y., et al.
Publicado: (2018)

In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping
por: Valdisser, Paula A. M. R., et al.
Publicado: (2017)

DArTSeq SNP-based markers revealed high genetic diversity and structured population in Ethiopian cowpea [Vigna unguiculata (L.) Walp] germplasms
por: Ketema, Selamawit, et al.
Publicado: (2020)

Genome-Wide association analysis of phenotypic traits in Bambara groundnut under drought-stressed and non-stressed conditions based on DArTseq SNP
por: Odesola, Kafilat Abiodun, et al.
Publicado: (2023)

Identification of quantitative trait loci (QTL) controlling resistance to pea weevil (Bruchus pisorum) in a high-density integrated DArTseq SNP-based genetic map of pea
por: Aznar-Fernández, Thais, et al.
Publicado: (2020)

Population structure and genetic diversity of a germplasm for hybrid breeding in rye (Secale cereale L.) using high-density DArTseq-based silicoDArT and SNP markers
por: Niedziela, Agnieszka, et al.
Publicado: (2023)

Sex-linked markers in the North American green frog (Rana clamitans) developed using DArTseq provide early insight into sex chromosome evolution
por: Lambert, Max R., et al.
Publicado: (2016)

High-density DArTSeq SNP markers revealed wide genetic diversity and structured population in common bean (Phaseolus vulgaris L.) germplasm in Ethiopia
por: Gelaw, Yonas Moges, et al.
Publicado: (2023)

DArTSeq SNP-based genetic diversity and population structure studies among taro [(Colocasia esculenta (L.) Schott] accessions sourced from Nigeria and Vanuatu
por: Fufa, Tilahun Wondimu, et al.
Publicado: (2022)

High-Density Mapping of an Adult-Plant Stripe Rust Resistance Gene YrBai in Wheat Landrace Baidatou Using the Whole Genome DArTseq and SNP Analysis
por: Li, Qiang, et al.
Publicado: (2018)

Whole Genome Diversity, Population Structure, and Linkage Disequilibrium Analysis of Chickpea (Cicer arietinum L.) Genotypes Using Genome-Wide DArTseq-Based SNP Markers
por: Farahani, Somayeh, et al.
Publicado: (2019)

Genome-Wide DArTSeq Genotyping and Phenotypic Based Assessment of Within and Among Accessions Diversity and Effective Sample Size in the Diverse Sorghum, Pearl Millet, and Pigeonpea Landraces
por: Allan, Victor, et al.
Publicado: (2020)

Global Phylogeographic and Admixture Patterns in Grey Wolves and Genetic Legacy of An Ancient Siberian Lineage
por: Pilot, Małgorzata, et al.
Publicado: (2019)

New insights on patterns of genetic admixture and phylogeographic history in Iberian high mountain populations of midwife toads
por: Lucati, Federica, et al.
Publicado: (2022)

Deciphering the patterns of genetic admixture and diversity in southern European cattle using genome‐wide SNPs
por: Upadhyay, Maulik, et al.
Publicado: (2019)

Phylogeographic and SNPs Analyses of Bemisia tabaci B Mitotype Populations Reveal Only Two of Eight Haplotypes Are Invasive
por: Paredes-Montero, Jorge R., et al.
Publicado: (2021)

Song convergence in multiple urban populations of silvereyes (Zosterops lateralis)
por: Potvin, Dominique A, et al.
Publicado: (2012)

Fast and accurate population admixture inference from genotype data from a few microsatellites to millions of SNPs
por: Wang, Jinliang
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_d0ggvpf4lac4p004tqc3fterd7