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A multiplex culture system for the long‐term growth of fission yeast cells

Maintenance of long‐term cultures of yeast cells is central to a broad range of investigations, from metabolic studies to laboratory evolution assays. However, repeated dilutions of batch cultures lead to variations in medium composition, with implications for cell physiology. In Saccharomyces cerev...

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Autores principales: Callens, Céline, Coelho, Nelson C., Miller, Aaron W., Sananes, Maria Rosa Domingo, Dunham, Maitreya J., Denoual, Matthieu, Coudreuse, Damien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5542872/
https://www.ncbi.nlm.nih.gov/pubmed/28426144
http://dx.doi.org/10.1002/yea.3237
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author Callens, Céline
Coelho, Nelson C.
Miller, Aaron W.
Sananes, Maria Rosa Domingo
Dunham, Maitreya J.
Denoual, Matthieu
Coudreuse, Damien
author_facet Callens, Céline
Coelho, Nelson C.
Miller, Aaron W.
Sananes, Maria Rosa Domingo
Dunham, Maitreya J.
Denoual, Matthieu
Coudreuse, Damien
author_sort Callens, Céline
collection PubMed
description Maintenance of long‐term cultures of yeast cells is central to a broad range of investigations, from metabolic studies to laboratory evolution assays. However, repeated dilutions of batch cultures lead to variations in medium composition, with implications for cell physiology. In Saccharomyces cerevisiae, powerful miniaturized chemostat setups, or ministat arrays, have been shown to allow for constant dilution of multiple independent cultures. Here we set out to adapt these arrays for continuous culture of a morphologically and physiologically distinct yeast, the fission yeast Schizosaccharomyces pombe, with the goal of maintaining constant population density over time. First, we demonstrated that the original ministats are incompatible with growing fission yeast for more than a few generations, prompting us to modify different aspects of the system design. Next, we identified critical parameters for sustaining unbiased vegetative growth in these conditions. This requires deletion of the gsf2 flocculin‐encoding gene, along with addition of galactose to the medium and lowering of the culture temperature. Importantly, we improved the flexibility of the ministats by developing a piezo‐pump module for the independent regulation of the dilution rate of each culture. This made it possible to easily grow strains that have different generation times in the same assay. Our system therefore allows for maintaining multiple fission yeast cultures in exponential growth, adapting the dilution of each culture over time to keep constant population density for hundreds of generations. These multiplex culture systems open the door to a new range of long‐term experiments using this model organism. © 2017 The Authors. Yeast published by John Wiley & Sons, Ltd.
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spelling pubmed-55428722017-09-18 A multiplex culture system for the long‐term growth of fission yeast cells Callens, Céline Coelho, Nelson C. Miller, Aaron W. Sananes, Maria Rosa Domingo Dunham, Maitreya J. Denoual, Matthieu Coudreuse, Damien Yeast Research Articles Maintenance of long‐term cultures of yeast cells is central to a broad range of investigations, from metabolic studies to laboratory evolution assays. However, repeated dilutions of batch cultures lead to variations in medium composition, with implications for cell physiology. In Saccharomyces cerevisiae, powerful miniaturized chemostat setups, or ministat arrays, have been shown to allow for constant dilution of multiple independent cultures. Here we set out to adapt these arrays for continuous culture of a morphologically and physiologically distinct yeast, the fission yeast Schizosaccharomyces pombe, with the goal of maintaining constant population density over time. First, we demonstrated that the original ministats are incompatible with growing fission yeast for more than a few generations, prompting us to modify different aspects of the system design. Next, we identified critical parameters for sustaining unbiased vegetative growth in these conditions. This requires deletion of the gsf2 flocculin‐encoding gene, along with addition of galactose to the medium and lowering of the culture temperature. Importantly, we improved the flexibility of the ministats by developing a piezo‐pump module for the independent regulation of the dilution rate of each culture. This made it possible to easily grow strains that have different generation times in the same assay. Our system therefore allows for maintaining multiple fission yeast cultures in exponential growth, adapting the dilution of each culture over time to keep constant population density for hundreds of generations. These multiplex culture systems open the door to a new range of long‐term experiments using this model organism. © 2017 The Authors. Yeast published by John Wiley & Sons, Ltd. John Wiley and Sons Inc. 2017-06-06 2017-08 /pmc/articles/PMC5542872/ /pubmed/28426144 http://dx.doi.org/10.1002/yea.3237 Text en © 2017 The Authors. Yeast published by John Wiley & Sons, Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Callens, Céline
Coelho, Nelson C.
Miller, Aaron W.
Sananes, Maria Rosa Domingo
Dunham, Maitreya J.
Denoual, Matthieu
Coudreuse, Damien
A multiplex culture system for the long‐term growth of fission yeast cells
title A multiplex culture system for the long‐term growth of fission yeast cells
title_full A multiplex culture system for the long‐term growth of fission yeast cells
title_fullStr A multiplex culture system for the long‐term growth of fission yeast cells
title_full_unstemmed A multiplex culture system for the long‐term growth of fission yeast cells
title_short A multiplex culture system for the long‐term growth of fission yeast cells
title_sort multiplex culture system for the long‐term growth of fission yeast cells
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5542872/
https://www.ncbi.nlm.nih.gov/pubmed/28426144
http://dx.doi.org/10.1002/yea.3237
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