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Scientific user requirements for a herbarium data portal

Abstract. The digitization of herbaria and their online access will greatly facilitate access to plant collections around the world. This will improve the efficiency of taxonomy and help reduce inequalities between scientists. The Botanic Garden Meise, Belgium, is currently digitizing 1.2 million sp...

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Autores principales: Vissers, Jorick, den Bosch, Frederik Van, Bogaerts, Ann, Cocquyt, Christine, Degreef, Jérôme, Diagre, Denis, de Haan, Myriam, Smedt, Sofie De, Henry Engledow, Ertz, Damien, Fabri, Régine, Godefroid, Sandrine, Nicole Hanquart, Mergen, Patricia, Ronse, Anne, Sosef, Marc, Stévart, Tariq, Stoffelen, Piet, Vanderhoeven, Sonia, Groom, Quentin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543274/
https://www.ncbi.nlm.nih.gov/pubmed/28781551
http://dx.doi.org/10.3897/phytokeys.78.10936
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author Vissers, Jorick
den Bosch, Frederik Van
Bogaerts, Ann
Cocquyt, Christine
Degreef, Jérôme
Diagre, Denis
de Haan, Myriam
Smedt, Sofie De
Henry Engledow,
Ertz, Damien
Fabri, Régine
Godefroid, Sandrine
Nicole Hanquart,
Mergen, Patricia
Ronse, Anne
Sosef, Marc
Stévart, Tariq
Stoffelen, Piet
Vanderhoeven, Sonia
Groom, Quentin
author_facet Vissers, Jorick
den Bosch, Frederik Van
Bogaerts, Ann
Cocquyt, Christine
Degreef, Jérôme
Diagre, Denis
de Haan, Myriam
Smedt, Sofie De
Henry Engledow,
Ertz, Damien
Fabri, Régine
Godefroid, Sandrine
Nicole Hanquart,
Mergen, Patricia
Ronse, Anne
Sosef, Marc
Stévart, Tariq
Stoffelen, Piet
Vanderhoeven, Sonia
Groom, Quentin
author_sort Vissers, Jorick
collection PubMed
description Abstract. The digitization of herbaria and their online access will greatly facilitate access to plant collections around the world. This will improve the efficiency of taxonomy and help reduce inequalities between scientists. The Botanic Garden Meise, Belgium, is currently digitizing 1.2 million specimens including label data. In this paper we describe the user requirements analysis conducted for a new herbarium web portal. The aim was to identify the required functionality, but also to assist in the prioritization of software development and data acquisition. The Garden conducted the analysis in cooperation with Clockwork, the digital engagement agency of Ordina. Using a series of interactive interviews, potential users were consulted from universities, research institutions, science-policy initiatives and the Botanic Garden Meise. Although digital herbarium data have many potential stakeholders, we focused on the needs of taxonomists, ecologists and historians, who are currently the primary users of the Meise herbarium data portal. The three categories of user have similar needs, all wanted as much specimen data as possible, and for those data, to be interlinked with other digital resources within and outside the Garden. Many users wanted an interactive system that they could comment on, or correct online, particularly if such corrections and annotations could be used to rank the reliability of data. Many requirements depend on the quality of the digitized data associated with each specimen. The essential data fields are the taxonomic name; geographic location; country; collection date; collector name and collection number. Also all researchers valued linkage between biodiversity literature and specimens. Nevertheless, to verify digitized data the researchers still want access to high quality images, even if fully transcribed label information is provided. The only major point of disagreement is the level of access users should have and what they should be allowed to do with the data and images. Not all of the user requirements are feasible given the current technical and regulatory landscape, however, the potential of these suggestions is discussed. Currently, there is no off-the-shelf solution to satisfy all these user requirements, but the intention of this paper is to guide other herbaria who are prioritising their investment in digitization and online web functionality.
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spelling pubmed-55432742017-08-04 Scientific user requirements for a herbarium data portal Vissers, Jorick den Bosch, Frederik Van Bogaerts, Ann Cocquyt, Christine Degreef, Jérôme Diagre, Denis de Haan, Myriam Smedt, Sofie De Henry Engledow, Ertz, Damien Fabri, Régine Godefroid, Sandrine Nicole Hanquart, Mergen, Patricia Ronse, Anne Sosef, Marc Stévart, Tariq Stoffelen, Piet Vanderhoeven, Sonia Groom, Quentin PhytoKeys Research Article Abstract. The digitization of herbaria and their online access will greatly facilitate access to plant collections around the world. This will improve the efficiency of taxonomy and help reduce inequalities between scientists. The Botanic Garden Meise, Belgium, is currently digitizing 1.2 million specimens including label data. In this paper we describe the user requirements analysis conducted for a new herbarium web portal. The aim was to identify the required functionality, but also to assist in the prioritization of software development and data acquisition. The Garden conducted the analysis in cooperation with Clockwork, the digital engagement agency of Ordina. Using a series of interactive interviews, potential users were consulted from universities, research institutions, science-policy initiatives and the Botanic Garden Meise. Although digital herbarium data have many potential stakeholders, we focused on the needs of taxonomists, ecologists and historians, who are currently the primary users of the Meise herbarium data portal. The three categories of user have similar needs, all wanted as much specimen data as possible, and for those data, to be interlinked with other digital resources within and outside the Garden. Many users wanted an interactive system that they could comment on, or correct online, particularly if such corrections and annotations could be used to rank the reliability of data. Many requirements depend on the quality of the digitized data associated with each specimen. The essential data fields are the taxonomic name; geographic location; country; collection date; collector name and collection number. Also all researchers valued linkage between biodiversity literature and specimens. Nevertheless, to verify digitized data the researchers still want access to high quality images, even if fully transcribed label information is provided. The only major point of disagreement is the level of access users should have and what they should be allowed to do with the data and images. Not all of the user requirements are feasible given the current technical and regulatory landscape, however, the potential of these suggestions is discussed. Currently, there is no off-the-shelf solution to satisfy all these user requirements, but the intention of this paper is to guide other herbaria who are prioritising their investment in digitization and online web functionality. Pensoft Publishers 2017-03-24 /pmc/articles/PMC5543274/ /pubmed/28781551 http://dx.doi.org/10.3897/phytokeys.78.10936 Text en Jorick Vissers, Frederik Van den Bosch, Ann Bogaerts, Christine Cocquyt, Jérôme Degreef, Denis Diagre, Myriam de Haan, Sofie De Smedt, Henry Engledow, Damien Ertz, Régine Fabri, Sandrine Godefroid, Nicole Hanquart, Patricia Mergen, Anne Ronse, Marc Sosef, Tariq Stévart, Piet Stoffelen, Sonia Vanderhoeven, Quentin Groom http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Vissers, Jorick
den Bosch, Frederik Van
Bogaerts, Ann
Cocquyt, Christine
Degreef, Jérôme
Diagre, Denis
de Haan, Myriam
Smedt, Sofie De
Henry Engledow,
Ertz, Damien
Fabri, Régine
Godefroid, Sandrine
Nicole Hanquart,
Mergen, Patricia
Ronse, Anne
Sosef, Marc
Stévart, Tariq
Stoffelen, Piet
Vanderhoeven, Sonia
Groom, Quentin
Scientific user requirements for a herbarium data portal
title Scientific user requirements for a herbarium data portal
title_full Scientific user requirements for a herbarium data portal
title_fullStr Scientific user requirements for a herbarium data portal
title_full_unstemmed Scientific user requirements for a herbarium data portal
title_short Scientific user requirements for a herbarium data portal
title_sort scientific user requirements for a herbarium data portal
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543274/
https://www.ncbi.nlm.nih.gov/pubmed/28781551
http://dx.doi.org/10.3897/phytokeys.78.10936
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