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Combining Kernel and Model Based Learning for HIV Therapy Selection
We present a mixture-of-experts approach for HIV therapy selection. The heterogeneity in patient data makes it difficult for one particular model to succeed at providing suitable therapy predictions for all patients. An appropriate means for addressing this heterogeneity is through combining kernel...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Medical Informatics Association
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543338/ https://www.ncbi.nlm.nih.gov/pubmed/28815137 |
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author | Parbhoo, Sonali Bogojeska, Jasmina Zazzi, Maurizio Roth, Volker Doshi-Velez, Finale |
author_facet | Parbhoo, Sonali Bogojeska, Jasmina Zazzi, Maurizio Roth, Volker Doshi-Velez, Finale |
author_sort | Parbhoo, Sonali |
collection | PubMed |
description | We present a mixture-of-experts approach for HIV therapy selection. The heterogeneity in patient data makes it difficult for one particular model to succeed at providing suitable therapy predictions for all patients. An appropriate means for addressing this heterogeneity is through combining kernel and model-based techniques. These methods capture different kinds of information: kernel-based methods are able to identify clusters of similar patients, and work well when modelling the viral response for these groups. In contrast, model-based methods capture the sequential process of decision making, and are able to find simpler, yet accurate patterns in response for patients outside these groups. We take advantage of this information by proposing a mixture-of-experts model that automatically selects between the methods in order to assign the most appropriate therapy choice to an individual. Overall, we verify that therapy combinations proposed using this approach significantly outperform previous methods. |
format | Online Article Text |
id | pubmed-5543338 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | American Medical Informatics Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-55433382017-08-16 Combining Kernel and Model Based Learning for HIV Therapy Selection Parbhoo, Sonali Bogojeska, Jasmina Zazzi, Maurizio Roth, Volker Doshi-Velez, Finale AMIA Jt Summits Transl Sci Proc Articles We present a mixture-of-experts approach for HIV therapy selection. The heterogeneity in patient data makes it difficult for one particular model to succeed at providing suitable therapy predictions for all patients. An appropriate means for addressing this heterogeneity is through combining kernel and model-based techniques. These methods capture different kinds of information: kernel-based methods are able to identify clusters of similar patients, and work well when modelling the viral response for these groups. In contrast, model-based methods capture the sequential process of decision making, and are able to find simpler, yet accurate patterns in response for patients outside these groups. We take advantage of this information by proposing a mixture-of-experts model that automatically selects between the methods in order to assign the most appropriate therapy choice to an individual. Overall, we verify that therapy combinations proposed using this approach significantly outperform previous methods. American Medical Informatics Association 2017-07-26 /pmc/articles/PMC5543338/ /pubmed/28815137 Text en ©2017 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose |
spellingShingle | Articles Parbhoo, Sonali Bogojeska, Jasmina Zazzi, Maurizio Roth, Volker Doshi-Velez, Finale Combining Kernel and Model Based Learning for HIV Therapy Selection |
title | Combining Kernel and Model Based Learning for HIV Therapy Selection |
title_full | Combining Kernel and Model Based Learning for HIV Therapy Selection |
title_fullStr | Combining Kernel and Model Based Learning for HIV Therapy Selection |
title_full_unstemmed | Combining Kernel and Model Based Learning for HIV Therapy Selection |
title_short | Combining Kernel and Model Based Learning for HIV Therapy Selection |
title_sort | combining kernel and model based learning for hiv therapy selection |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543338/ https://www.ncbi.nlm.nih.gov/pubmed/28815137 |
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