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Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes

Peripheral arterial disease (PAD) is a chronic disease that affects millions of people worldwide and yet remains underdiagnosed and undertreated. Early detection is important, because PAD is strongly associated with an increased risk of mortality and morbidity. In this study, we built a PAD surveill...

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Autores principales: Afzal, Naveed, Sohn, Sunghwan, Scott, Christopher G., Liu, Hongfang, Kullo, Iftikhar J., Arruda-Olson, Adelaide M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Informatics Association 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543345/
https://www.ncbi.nlm.nih.gov/pubmed/28815100
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author Afzal, Naveed
Sohn, Sunghwan
Scott, Christopher G.
Liu, Hongfang
Kullo, Iftikhar J.
Arruda-Olson, Adelaide M.
author_facet Afzal, Naveed
Sohn, Sunghwan
Scott, Christopher G.
Liu, Hongfang
Kullo, Iftikhar J.
Arruda-Olson, Adelaide M.
author_sort Afzal, Naveed
collection PubMed
description Peripheral arterial disease (PAD) is a chronic disease that affects millions of people worldwide and yet remains underdiagnosed and undertreated. Early detection is important, because PAD is strongly associated with an increased risk of mortality and morbidity. In this study, we built a PAD surveillance system using natural language processing (NLP) for early detection of PAD from narrative clinical notes. Our NLP algorithm had excellent positive predictive value (0.93) and identified 41% of PAD cases before the initial ankle-brachial index (ABI) test date while in 12% of cases the NLP algorithm detected PAD on the same date as the ABI (the gold standard for comparison). Hence, our system ascertains PAD patients in a timely and accurate manner. In conclusion, our PAD surveillance NLP algorithm has the potential for translation to clinical practice for use in reminding clinicians to order ABI tests in patients with suspected PAD and to reinforce the implementation of guideline recommended risk modification strategies in patients diagnosed with PAD.
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spelling pubmed-55433452017-08-16 Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes Afzal, Naveed Sohn, Sunghwan Scott, Christopher G. Liu, Hongfang Kullo, Iftikhar J. Arruda-Olson, Adelaide M. AMIA Jt Summits Transl Sci Proc Articles Peripheral arterial disease (PAD) is a chronic disease that affects millions of people worldwide and yet remains underdiagnosed and undertreated. Early detection is important, because PAD is strongly associated with an increased risk of mortality and morbidity. In this study, we built a PAD surveillance system using natural language processing (NLP) for early detection of PAD from narrative clinical notes. Our NLP algorithm had excellent positive predictive value (0.93) and identified 41% of PAD cases before the initial ankle-brachial index (ABI) test date while in 12% of cases the NLP algorithm detected PAD on the same date as the ABI (the gold standard for comparison). Hence, our system ascertains PAD patients in a timely and accurate manner. In conclusion, our PAD surveillance NLP algorithm has the potential for translation to clinical practice for use in reminding clinicians to order ABI tests in patients with suspected PAD and to reinforce the implementation of guideline recommended risk modification strategies in patients diagnosed with PAD. American Medical Informatics Association 2017-07-26 /pmc/articles/PMC5543345/ /pubmed/28815100 Text en ©2017 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose
spellingShingle Articles
Afzal, Naveed
Sohn, Sunghwan
Scott, Christopher G.
Liu, Hongfang
Kullo, Iftikhar J.
Arruda-Olson, Adelaide M.
Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes
title Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes
title_full Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes
title_fullStr Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes
title_full_unstemmed Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes
title_short Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes
title_sort surveillance of peripheral arterial disease cases using natural language processing of clinical notes
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543345/
https://www.ncbi.nlm.nih.gov/pubmed/28815100
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