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An Exploration of Latent Structure in Observational Huntington’s Disease Studies

Huntington’s disease (HD) is a monogenic neurodegenerative disorder characterized by the progressive decay of motor and cognitive abilities accompanied by psychiatric episodes. Tracking and modeling the progression of the multi-faceted clinical symptoms of HD is a challenging problem that has import...

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Autores principales: Ghosh, Soumya, Sun, Zhaonan, Li, Ying, Cheng, Yu, Mohan, Amrita, Sampaio, Cristina, Hu, Jianying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Informatics Association 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543350/
https://www.ncbi.nlm.nih.gov/pubmed/28815114
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author Ghosh, Soumya
Sun, Zhaonan
Li, Ying
Cheng, Yu
Mohan, Amrita
Sampaio, Cristina
Hu, Jianying
author_facet Ghosh, Soumya
Sun, Zhaonan
Li, Ying
Cheng, Yu
Mohan, Amrita
Sampaio, Cristina
Hu, Jianying
author_sort Ghosh, Soumya
collection PubMed
description Huntington’s disease (HD) is a monogenic neurodegenerative disorder characterized by the progressive decay of motor and cognitive abilities accompanied by psychiatric episodes. Tracking and modeling the progression of the multi-faceted clinical symptoms of HD is a challenging problem that has important implications for staging of HD patients and the development of improved enrollment criteria for future HD studies and trials. In this paper, we describe the first steps towards this goal. We begin by curating data from four recent observational HD studies, each containing a diverse collection of clinical assessments. The resulting dataset is unprecedented in size and contains data from 19,269 study participants. By analyzing this large dataset, we are able to discover hidden low dimensional structure in the data that correlates well with surrogate measures of HD progression. The discovered structures are promising candidates for future consumption by downstream statistical HD progression models.
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spelling pubmed-55433502017-08-16 An Exploration of Latent Structure in Observational Huntington’s Disease Studies Ghosh, Soumya Sun, Zhaonan Li, Ying Cheng, Yu Mohan, Amrita Sampaio, Cristina Hu, Jianying AMIA Jt Summits Transl Sci Proc Articles Huntington’s disease (HD) is a monogenic neurodegenerative disorder characterized by the progressive decay of motor and cognitive abilities accompanied by psychiatric episodes. Tracking and modeling the progression of the multi-faceted clinical symptoms of HD is a challenging problem that has important implications for staging of HD patients and the development of improved enrollment criteria for future HD studies and trials. In this paper, we describe the first steps towards this goal. We begin by curating data from four recent observational HD studies, each containing a diverse collection of clinical assessments. The resulting dataset is unprecedented in size and contains data from 19,269 study participants. By analyzing this large dataset, we are able to discover hidden low dimensional structure in the data that correlates well with surrogate measures of HD progression. The discovered structures are promising candidates for future consumption by downstream statistical HD progression models. American Medical Informatics Association 2017-07-26 /pmc/articles/PMC5543350/ /pubmed/28815114 Text en ©2017 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose
spellingShingle Articles
Ghosh, Soumya
Sun, Zhaonan
Li, Ying
Cheng, Yu
Mohan, Amrita
Sampaio, Cristina
Hu, Jianying
An Exploration of Latent Structure in Observational Huntington’s Disease Studies
title An Exploration of Latent Structure in Observational Huntington’s Disease Studies
title_full An Exploration of Latent Structure in Observational Huntington’s Disease Studies
title_fullStr An Exploration of Latent Structure in Observational Huntington’s Disease Studies
title_full_unstemmed An Exploration of Latent Structure in Observational Huntington’s Disease Studies
title_short An Exploration of Latent Structure in Observational Huntington’s Disease Studies
title_sort exploration of latent structure in observational huntington’s disease studies
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543350/
https://www.ncbi.nlm.nih.gov/pubmed/28815114
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