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An Exploration of Latent Structure in Observational Huntington’s Disease Studies
Huntington’s disease (HD) is a monogenic neurodegenerative disorder characterized by the progressive decay of motor and cognitive abilities accompanied by psychiatric episodes. Tracking and modeling the progression of the multi-faceted clinical symptoms of HD is a challenging problem that has import...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Medical Informatics Association
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543350/ https://www.ncbi.nlm.nih.gov/pubmed/28815114 |
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author | Ghosh, Soumya Sun, Zhaonan Li, Ying Cheng, Yu Mohan, Amrita Sampaio, Cristina Hu, Jianying |
author_facet | Ghosh, Soumya Sun, Zhaonan Li, Ying Cheng, Yu Mohan, Amrita Sampaio, Cristina Hu, Jianying |
author_sort | Ghosh, Soumya |
collection | PubMed |
description | Huntington’s disease (HD) is a monogenic neurodegenerative disorder characterized by the progressive decay of motor and cognitive abilities accompanied by psychiatric episodes. Tracking and modeling the progression of the multi-faceted clinical symptoms of HD is a challenging problem that has important implications for staging of HD patients and the development of improved enrollment criteria for future HD studies and trials. In this paper, we describe the first steps towards this goal. We begin by curating data from four recent observational HD studies, each containing a diverse collection of clinical assessments. The resulting dataset is unprecedented in size and contains data from 19,269 study participants. By analyzing this large dataset, we are able to discover hidden low dimensional structure in the data that correlates well with surrogate measures of HD progression. The discovered structures are promising candidates for future consumption by downstream statistical HD progression models. |
format | Online Article Text |
id | pubmed-5543350 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | American Medical Informatics Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-55433502017-08-16 An Exploration of Latent Structure in Observational Huntington’s Disease Studies Ghosh, Soumya Sun, Zhaonan Li, Ying Cheng, Yu Mohan, Amrita Sampaio, Cristina Hu, Jianying AMIA Jt Summits Transl Sci Proc Articles Huntington’s disease (HD) is a monogenic neurodegenerative disorder characterized by the progressive decay of motor and cognitive abilities accompanied by psychiatric episodes. Tracking and modeling the progression of the multi-faceted clinical symptoms of HD is a challenging problem that has important implications for staging of HD patients and the development of improved enrollment criteria for future HD studies and trials. In this paper, we describe the first steps towards this goal. We begin by curating data from four recent observational HD studies, each containing a diverse collection of clinical assessments. The resulting dataset is unprecedented in size and contains data from 19,269 study participants. By analyzing this large dataset, we are able to discover hidden low dimensional structure in the data that correlates well with surrogate measures of HD progression. The discovered structures are promising candidates for future consumption by downstream statistical HD progression models. American Medical Informatics Association 2017-07-26 /pmc/articles/PMC5543350/ /pubmed/28815114 Text en ©2017 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose |
spellingShingle | Articles Ghosh, Soumya Sun, Zhaonan Li, Ying Cheng, Yu Mohan, Amrita Sampaio, Cristina Hu, Jianying An Exploration of Latent Structure in Observational Huntington’s Disease Studies |
title | An Exploration of Latent Structure in Observational Huntington’s Disease Studies |
title_full | An Exploration of Latent Structure in Observational Huntington’s Disease Studies |
title_fullStr | An Exploration of Latent Structure in Observational Huntington’s Disease Studies |
title_full_unstemmed | An Exploration of Latent Structure in Observational Huntington’s Disease Studies |
title_short | An Exploration of Latent Structure in Observational Huntington’s Disease Studies |
title_sort | exploration of latent structure in observational huntington’s disease studies |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543350/ https://www.ncbi.nlm.nih.gov/pubmed/28815114 |
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