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Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research
Cancer is a complex multifactorial disease state and the ability to anticipate and steer treatment results will require information synthesis across multiple scales from the host to the molecular level. Radiomics and Pathomics, where image features are extracted from routine diagnostic Radiology and...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Medical Informatics Association
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543366/ https://www.ncbi.nlm.nih.gov/pubmed/28815113 |
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author | Saltz, Joel Almeida, Jonas Gao, Yi Sharma, Ashish Bremer, Erich DiPrima, Tammy Saltz, Mary Kalpathy-Cramer, Jayashree Kurc, Tahsin |
author_facet | Saltz, Joel Almeida, Jonas Gao, Yi Sharma, Ashish Bremer, Erich DiPrima, Tammy Saltz, Mary Kalpathy-Cramer, Jayashree Kurc, Tahsin |
author_sort | Saltz, Joel |
collection | PubMed |
description | Cancer is a complex multifactorial disease state and the ability to anticipate and steer treatment results will require information synthesis across multiple scales from the host to the molecular level. Radiomics and Pathomics, where image features are extracted from routine diagnostic Radiology and Pathology studies, are also evolving as valuable diagnostic and prognostic indicators in cancer. This information explosion provides new opportunities for integrated, multi-scale investigation of cancer, but also mandates a need to build systematic and integrated approaches to manage, query and mine combined Radiomics and Pathomics data. In this paper, we describe a suite of tools and web-based applications towards building a comprehensive framework to support the generation, management and interrogation of large volumes of Radiomics and Pathomics feature sets and the investigation of correlations between image features, molecular data, and clinical outcome. |
format | Online Article Text |
id | pubmed-5543366 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | American Medical Informatics Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-55433662017-08-16 Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research Saltz, Joel Almeida, Jonas Gao, Yi Sharma, Ashish Bremer, Erich DiPrima, Tammy Saltz, Mary Kalpathy-Cramer, Jayashree Kurc, Tahsin AMIA Jt Summits Transl Sci Proc Articles Cancer is a complex multifactorial disease state and the ability to anticipate and steer treatment results will require information synthesis across multiple scales from the host to the molecular level. Radiomics and Pathomics, where image features are extracted from routine diagnostic Radiology and Pathology studies, are also evolving as valuable diagnostic and prognostic indicators in cancer. This information explosion provides new opportunities for integrated, multi-scale investigation of cancer, but also mandates a need to build systematic and integrated approaches to manage, query and mine combined Radiomics and Pathomics data. In this paper, we describe a suite of tools and web-based applications towards building a comprehensive framework to support the generation, management and interrogation of large volumes of Radiomics and Pathomics feature sets and the investigation of correlations between image features, molecular data, and clinical outcome. American Medical Informatics Association 2017-07-26 /pmc/articles/PMC5543366/ /pubmed/28815113 Text en ©2017 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose |
spellingShingle | Articles Saltz, Joel Almeida, Jonas Gao, Yi Sharma, Ashish Bremer, Erich DiPrima, Tammy Saltz, Mary Kalpathy-Cramer, Jayashree Kurc, Tahsin Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research |
title | Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research |
title_full | Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research |
title_fullStr | Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research |
title_full_unstemmed | Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research |
title_short | Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research |
title_sort | towards generation, management, and exploration of combined radiomics and pathomics datasets for cancer research |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543366/ https://www.ncbi.nlm.nih.gov/pubmed/28815113 |
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