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Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae)(1)

PREMISE OF THE STUDY: Microsatellite primers (simple sequence repeats [SSRs]) were developed in Guibourtia ehie (Fabaceae, Detarioideae) to study population genetic structure and the history of African vegetation. METHODS AND RESULTS: We isolated 18 polymorphic SSRs from a nonenriched genomic librar...

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Autores principales: Tosso, Félicien, Doucet, Jean-Louis, Migliore, Jérémy, Daïnou, Kasso, Kaymak, Esra, Kameni, Franck S. Monthe, Hardy, Olivier J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5546166/
https://www.ncbi.nlm.nih.gov/pubmed/28791206
http://dx.doi.org/10.3732/apps.1700023
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author Tosso, Félicien
Doucet, Jean-Louis
Migliore, Jérémy
Daïnou, Kasso
Kaymak, Esra
Kameni, Franck S. Monthe
Hardy, Olivier J.
author_facet Tosso, Félicien
Doucet, Jean-Louis
Migliore, Jérémy
Daïnou, Kasso
Kaymak, Esra
Kameni, Franck S. Monthe
Hardy, Olivier J.
author_sort Tosso, Félicien
collection PubMed
description PREMISE OF THE STUDY: Microsatellite primers (simple sequence repeats [SSRs]) were developed in Guibourtia ehie (Fabaceae, Detarioideae) to study population genetic structure and the history of African vegetation. METHODS AND RESULTS: We isolated 18 polymorphic SSRs from a nonenriched genomic library. This set of primer pairs was tested on four populations, and the results showed two to 16 alleles per locus with mean observed and expected heterozygosities of 0.27 ± 0.05 and 0.57 ± 0.05, respectively. Cross-amplification tests in 13 congeneric species were successful for the four taxa belonging to the subgenus Gorskia. CONCLUSIONS: This set of microsatellite markers will be useful to investigate the phylogeography and population genetics of G. ehie, a key representative of African semideciduous moist forests.
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spelling pubmed-55461662017-08-08 Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae)(1) Tosso, Félicien Doucet, Jean-Louis Migliore, Jérémy Daïnou, Kasso Kaymak, Esra Kameni, Franck S. Monthe Hardy, Olivier J. Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite primers (simple sequence repeats [SSRs]) were developed in Guibourtia ehie (Fabaceae, Detarioideae) to study population genetic structure and the history of African vegetation. METHODS AND RESULTS: We isolated 18 polymorphic SSRs from a nonenriched genomic library. This set of primer pairs was tested on four populations, and the results showed two to 16 alleles per locus with mean observed and expected heterozygosities of 0.27 ± 0.05 and 0.57 ± 0.05, respectively. Cross-amplification tests in 13 congeneric species were successful for the four taxa belonging to the subgenus Gorskia. CONCLUSIONS: This set of microsatellite markers will be useful to investigate the phylogeography and population genetics of G. ehie, a key representative of African semideciduous moist forests. Botanical Society of America 2017-07-26 /pmc/articles/PMC5546166/ /pubmed/28791206 http://dx.doi.org/10.3732/apps.1700023 Text en © 2017 Tosso et al. Published by the Botanical Society of America https://creativecommons.org/licenses/by-nc-sa/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC-BY-NC-SA 4.0 (https://creativecommons.org/licenses/by-nc-sa/4.0/) ), which permits unrestricted noncommercial use and redistribution provided that the original author and source are credited and the new work is distributed under the same license as the original.
spellingShingle Primer Note
Tosso, Félicien
Doucet, Jean-Louis
Migliore, Jérémy
Daïnou, Kasso
Kaymak, Esra
Kameni, Franck S. Monthe
Hardy, Olivier J.
Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae)(1)
title Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae)(1)
title_full Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae)(1)
title_fullStr Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae)(1)
title_full_unstemmed Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae)(1)
title_short Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae)(1)
title_sort characterization of microsatellite markers in the african tropical tree species guibourtia ehie (fabaceae, detarioideae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5546166/
https://www.ncbi.nlm.nih.gov/pubmed/28791206
http://dx.doi.org/10.3732/apps.1700023
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