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Novel microsatellite development and characterization for Phacelia formosula (Hydrophyllaceae)(1)

PREMISE OF THE STUDY: Microsatellite primers were developed to characterize genetic diversity and structuring in the genus Phacelia (Hydrophyllaceae) and to further conservation efforts for P. formosula. METHODS AND RESULTS: Fifteen novel microsatellite primers were developed for P. formosula. These...

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Detalles Bibliográficos
Autores principales: Riser, James P., Schwabe, Anna L., Neale, Jennifer Ramp
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5546168/
https://www.ncbi.nlm.nih.gov/pubmed/28791208
http://dx.doi.org/10.3732/apps.1700030
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author Riser, James P.
Schwabe, Anna L.
Neale, Jennifer Ramp
author_facet Riser, James P.
Schwabe, Anna L.
Neale, Jennifer Ramp
author_sort Riser, James P.
collection PubMed
description PREMISE OF THE STUDY: Microsatellite primers were developed to characterize genetic diversity and structuring in the genus Phacelia (Hydrophyllaceae) and to further conservation efforts for P. formosula. METHODS AND RESULTS: Fifteen novel microsatellite primers were developed for P. formosula. These were characterized for genetic variation in three separate P. formosula populations. Two to nine alleles were found per locus. Overall observed heterozygosity and expected heterozygosity ranged from 0.000 to 0.800 and 0.000 to 0.840, respectively. Additionally, these loci were successfully amplified and showed polymorphism in P. gina-glenneae and a potential new Phacelia species. CONCLUSIONS: These microsatellite markers will be useful in assessing genetic diversity, structuring, and gene flow within and among populations of the rare P. formosula, in addition to related Phacelia species. These markers will provide important genetic data needed for appropriate conservation and management of these rare plants.
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spelling pubmed-55461682017-08-08 Novel microsatellite development and characterization for Phacelia formosula (Hydrophyllaceae)(1) Riser, James P. Schwabe, Anna L. Neale, Jennifer Ramp Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite primers were developed to characterize genetic diversity and structuring in the genus Phacelia (Hydrophyllaceae) and to further conservation efforts for P. formosula. METHODS AND RESULTS: Fifteen novel microsatellite primers were developed for P. formosula. These were characterized for genetic variation in three separate P. formosula populations. Two to nine alleles were found per locus. Overall observed heterozygosity and expected heterozygosity ranged from 0.000 to 0.800 and 0.000 to 0.840, respectively. Additionally, these loci were successfully amplified and showed polymorphism in P. gina-glenneae and a potential new Phacelia species. CONCLUSIONS: These microsatellite markers will be useful in assessing genetic diversity, structuring, and gene flow within and among populations of the rare P. formosula, in addition to related Phacelia species. These markers will provide important genetic data needed for appropriate conservation and management of these rare plants. Botanical Society of America 2017-07-19 /pmc/articles/PMC5546168/ /pubmed/28791208 http://dx.doi.org/10.3732/apps.1700030 Text en © 2017 Riser et al. Published by the Botanical Society of America https://creativecommons.org/licenses/by-nc-sa/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC-BY-NC-SA 4.0 (https://creativecommons.org/licenses/by-nc-sa/4.0/) ), which permits unrestricted noncommercial use and redistribution provided that the original author and source are credited and the new work is distributed under the same license as the original.
spellingShingle Primer Note
Riser, James P.
Schwabe, Anna L.
Neale, Jennifer Ramp
Novel microsatellite development and characterization for Phacelia formosula (Hydrophyllaceae)(1)
title Novel microsatellite development and characterization for Phacelia formosula (Hydrophyllaceae)(1)
title_full Novel microsatellite development and characterization for Phacelia formosula (Hydrophyllaceae)(1)
title_fullStr Novel microsatellite development and characterization for Phacelia formosula (Hydrophyllaceae)(1)
title_full_unstemmed Novel microsatellite development and characterization for Phacelia formosula (Hydrophyllaceae)(1)
title_short Novel microsatellite development and characterization for Phacelia formosula (Hydrophyllaceae)(1)
title_sort novel microsatellite development and characterization for phacelia formosula (hydrophyllaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5546168/
https://www.ncbi.nlm.nih.gov/pubmed/28791208
http://dx.doi.org/10.3732/apps.1700030
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