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AOD: the antioxidant protein database

An antioxidant is a molecule that can prevent free radicals from causing damages in organisms. The increasing studies on antioxidants calls for a specialized database that is not readily available yet. To this end, in the present study, the Antioxidant Database (AOD) was developed to help researcher...

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Detalles Bibliográficos
Autores principales: Feng, Pengmian, Ding, Hui, Lin, Hao, Chen, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5547145/
https://www.ncbi.nlm.nih.gov/pubmed/28784999
http://dx.doi.org/10.1038/s41598-017-08115-6
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author Feng, Pengmian
Ding, Hui
Lin, Hao
Chen, Wei
author_facet Feng, Pengmian
Ding, Hui
Lin, Hao
Chen, Wei
author_sort Feng, Pengmian
collection PubMed
description An antioxidant is a molecule that can prevent free radicals from causing damages in organisms. The increasing studies on antioxidants calls for a specialized database that is not readily available yet. To this end, in the present study, the Antioxidant Database (AOD) was developed to help researchers understand and reveal the biological functions of antioxidant proteins. AOD is freely available at http://lin.uestc.edu.cn/AODdatabase/index.aspx. The current release of AOD consists of 710 antioxidant proteins. Information including taxonomy, source organism, subcellular location, gene ontology, catalytic activity and function of antioxidant proteins are all extracted from UniProtKB/Swiss-Prot and captured in AOD. In addition, two web-based tools for performing sequence similarity search and computationally identification of antioxidants were also integrated in AOD. We believe that AOD will greatly facilitate the researches on antioxidants.
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spelling pubmed-55471452017-08-09 AOD: the antioxidant protein database Feng, Pengmian Ding, Hui Lin, Hao Chen, Wei Sci Rep Article An antioxidant is a molecule that can prevent free radicals from causing damages in organisms. The increasing studies on antioxidants calls for a specialized database that is not readily available yet. To this end, in the present study, the Antioxidant Database (AOD) was developed to help researchers understand and reveal the biological functions of antioxidant proteins. AOD is freely available at http://lin.uestc.edu.cn/AODdatabase/index.aspx. The current release of AOD consists of 710 antioxidant proteins. Information including taxonomy, source organism, subcellular location, gene ontology, catalytic activity and function of antioxidant proteins are all extracted from UniProtKB/Swiss-Prot and captured in AOD. In addition, two web-based tools for performing sequence similarity search and computationally identification of antioxidants were also integrated in AOD. We believe that AOD will greatly facilitate the researches on antioxidants. Nature Publishing Group UK 2017-08-07 /pmc/articles/PMC5547145/ /pubmed/28784999 http://dx.doi.org/10.1038/s41598-017-08115-6 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Feng, Pengmian
Ding, Hui
Lin, Hao
Chen, Wei
AOD: the antioxidant protein database
title AOD: the antioxidant protein database
title_full AOD: the antioxidant protein database
title_fullStr AOD: the antioxidant protein database
title_full_unstemmed AOD: the antioxidant protein database
title_short AOD: the antioxidant protein database
title_sort aod: the antioxidant protein database
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5547145/
https://www.ncbi.nlm.nih.gov/pubmed/28784999
http://dx.doi.org/10.1038/s41598-017-08115-6
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