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Chemosensory genes in the antennal transcriptome of two syrphid species,Episyrphus balteatusandEupeodes corollae (Diptera: Syrphidae)

BACKGROUND: Predatory syrphid larvae are an important natural enemy of aphids in cotton agro-ecosystems in China. Their behaviors in prey foraging, localization and oviposition greatly rely on the perception of chemical cues. As a first step to better understand syrphid olfaction at the molecular le...

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Autores principales: Wang, Bing, Liu, Yang, Wang, Gui-Rong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5547493/
https://www.ncbi.nlm.nih.gov/pubmed/28784086
http://dx.doi.org/10.1186/s12864-017-3939-4
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author Wang, Bing
Liu, Yang
Wang, Gui-Rong
author_facet Wang, Bing
Liu, Yang
Wang, Gui-Rong
author_sort Wang, Bing
collection PubMed
description BACKGROUND: Predatory syrphid larvae are an important natural enemy of aphids in cotton agro-ecosystems in China. Their behaviors in prey foraging, localization and oviposition greatly rely on the perception of chemical cues. As a first step to better understand syrphid olfaction at the molecular level, we have performed a systematic identification of their major chemosensory genes. RESULTS: Male and female antennal transcriptomes of Episyrphus balteatus and Eupeodes corollae were sequenced and assembled using Illumina HiSeq2000 technology. A total of 154 chemosensory genes in E. balteatus transcriptome, including candidate 51 odorant receptors (ORs), 32 ionotropic receptors (IRs), 14 gustatory receptors (GRs), 49 odorant-binding proteins (OBPs), 6 chemosensory proteins (CSPs) and 2 sensory neuron membrane proteins (SNMPs) were identified. In E. corollae transcriptome, we identified 134 genes including 42 ORs, 23 IRs, 16 GRs, 44 OBPs, 7 CSPs and 2 SNMPs. We have provided full-length sequences of the highly conserved co-receptor Orco, IR8a/25a family and carbon dioxide gustatory receptor in both syrphid species. The expression of candidate OR genes in the two syrphid species was evaluated by semi-quantitative reverse transcription PCR. There were no significant differences of transcript abundances in the respective male and female antenna, which is consistent with differentially expressed genes (DEGs) analysis using the FPKM value. The sequences of candidate chemosensory genes were confirmed and phylogenetic analysis was performed. CONCLUSIONS: This research comprehensively analyzed and identified many novel candidate chemosensory genes regarding syrphid olfaction. It provides an opportunity for understanding how syrphid insects use chemical cues to conduct their behaviors among tritrophic interactions of plants, herbivorous insects, and natural enemies in agricultural ecosystems. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-017-3939-4) contains supplementary material, which is available to authorized users.
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spelling pubmed-55474932017-08-09 Chemosensory genes in the antennal transcriptome of two syrphid species,Episyrphus balteatusandEupeodes corollae (Diptera: Syrphidae) Wang, Bing Liu, Yang Wang, Gui-Rong BMC Genomics Research Article BACKGROUND: Predatory syrphid larvae are an important natural enemy of aphids in cotton agro-ecosystems in China. Their behaviors in prey foraging, localization and oviposition greatly rely on the perception of chemical cues. As a first step to better understand syrphid olfaction at the molecular level, we have performed a systematic identification of their major chemosensory genes. RESULTS: Male and female antennal transcriptomes of Episyrphus balteatus and Eupeodes corollae were sequenced and assembled using Illumina HiSeq2000 technology. A total of 154 chemosensory genes in E. balteatus transcriptome, including candidate 51 odorant receptors (ORs), 32 ionotropic receptors (IRs), 14 gustatory receptors (GRs), 49 odorant-binding proteins (OBPs), 6 chemosensory proteins (CSPs) and 2 sensory neuron membrane proteins (SNMPs) were identified. In E. corollae transcriptome, we identified 134 genes including 42 ORs, 23 IRs, 16 GRs, 44 OBPs, 7 CSPs and 2 SNMPs. We have provided full-length sequences of the highly conserved co-receptor Orco, IR8a/25a family and carbon dioxide gustatory receptor in both syrphid species. The expression of candidate OR genes in the two syrphid species was evaluated by semi-quantitative reverse transcription PCR. There were no significant differences of transcript abundances in the respective male and female antenna, which is consistent with differentially expressed genes (DEGs) analysis using the FPKM value. The sequences of candidate chemosensory genes were confirmed and phylogenetic analysis was performed. CONCLUSIONS: This research comprehensively analyzed and identified many novel candidate chemosensory genes regarding syrphid olfaction. It provides an opportunity for understanding how syrphid insects use chemical cues to conduct their behaviors among tritrophic interactions of plants, herbivorous insects, and natural enemies in agricultural ecosystems. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-017-3939-4) contains supplementary material, which is available to authorized users. BioMed Central 2017-08-07 /pmc/articles/PMC5547493/ /pubmed/28784086 http://dx.doi.org/10.1186/s12864-017-3939-4 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Wang, Bing
Liu, Yang
Wang, Gui-Rong
Chemosensory genes in the antennal transcriptome of two syrphid species,Episyrphus balteatusandEupeodes corollae (Diptera: Syrphidae)
title Chemosensory genes in the antennal transcriptome of two syrphid species,Episyrphus balteatusandEupeodes corollae (Diptera: Syrphidae)
title_full Chemosensory genes in the antennal transcriptome of two syrphid species,Episyrphus balteatusandEupeodes corollae (Diptera: Syrphidae)
title_fullStr Chemosensory genes in the antennal transcriptome of two syrphid species,Episyrphus balteatusandEupeodes corollae (Diptera: Syrphidae)
title_full_unstemmed Chemosensory genes in the antennal transcriptome of two syrphid species,Episyrphus balteatusandEupeodes corollae (Diptera: Syrphidae)
title_short Chemosensory genes in the antennal transcriptome of two syrphid species,Episyrphus balteatusandEupeodes corollae (Diptera: Syrphidae)
title_sort chemosensory genes in the antennal transcriptome of two syrphid species,episyrphus balteatusandeupeodes corollae (diptera: syrphidae)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5547493/
https://www.ncbi.nlm.nih.gov/pubmed/28784086
http://dx.doi.org/10.1186/s12864-017-3939-4
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