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Multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated Serratia marcescens
To add to the current state of knowledge about bacterial swimming dynamics, in this paper, we study the fractal swimming dynamics of populations of Serratia marcescens bacteria both in vitro and in silico, while accounting for realistic conditions like volume exclusion, chemical interactions, obstac...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society Publishing
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5549567/ https://www.ncbi.nlm.nih.gov/pubmed/28804259 http://dx.doi.org/10.1098/rspa.2017.0154 |
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author | Koorehdavoudi, Hana Bogdan, Paul Wei, Guopeng Marculescu, Radu Zhuang, Jiang Carlsen, Rika Wright Sitti, Metin |
author_facet | Koorehdavoudi, Hana Bogdan, Paul Wei, Guopeng Marculescu, Radu Zhuang, Jiang Carlsen, Rika Wright Sitti, Metin |
author_sort | Koorehdavoudi, Hana |
collection | PubMed |
description | To add to the current state of knowledge about bacterial swimming dynamics, in this paper, we study the fractal swimming dynamics of populations of Serratia marcescens bacteria both in vitro and in silico, while accounting for realistic conditions like volume exclusion, chemical interactions, obstacles and distribution of chemoattractant in the environment. While previous research has shown that bacterial motion is non-ergodic, we demonstrate that, besides the non-ergodicity, the bacterial swimming dynamics is multi-fractal in nature. Finally, we demonstrate that the multi-fractal characteristic of bacterial dynamics is strongly affected by bacterial density and chemoattractant concentration. |
format | Online Article Text |
id | pubmed-5549567 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | The Royal Society Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-55495672017-08-11 Multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated Serratia marcescens Koorehdavoudi, Hana Bogdan, Paul Wei, Guopeng Marculescu, Radu Zhuang, Jiang Carlsen, Rika Wright Sitti, Metin Proc Math Phys Eng Sci Research Articles To add to the current state of knowledge about bacterial swimming dynamics, in this paper, we study the fractal swimming dynamics of populations of Serratia marcescens bacteria both in vitro and in silico, while accounting for realistic conditions like volume exclusion, chemical interactions, obstacles and distribution of chemoattractant in the environment. While previous research has shown that bacterial motion is non-ergodic, we demonstrate that, besides the non-ergodicity, the bacterial swimming dynamics is multi-fractal in nature. Finally, we demonstrate that the multi-fractal characteristic of bacterial dynamics is strongly affected by bacterial density and chemoattractant concentration. The Royal Society Publishing 2017-07 2017-07-12 /pmc/articles/PMC5549567/ /pubmed/28804259 http://dx.doi.org/10.1098/rspa.2017.0154 Text en © 2017 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Research Articles Koorehdavoudi, Hana Bogdan, Paul Wei, Guopeng Marculescu, Radu Zhuang, Jiang Carlsen, Rika Wright Sitti, Metin Multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated Serratia marcescens |
title | Multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated Serratia marcescens |
title_full | Multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated Serratia marcescens |
title_fullStr | Multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated Serratia marcescens |
title_full_unstemmed | Multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated Serratia marcescens |
title_short | Multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated Serratia marcescens |
title_sort | multi-fractal characterization of bacterial swimming dynamics: a case study on real and simulated serratia marcescens |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5549567/ https://www.ncbi.nlm.nih.gov/pubmed/28804259 http://dx.doi.org/10.1098/rspa.2017.0154 |
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