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Automated migration analysis based on cell texture: method & reliability

BACKGROUND: In this paper, we present and validate a way to measure automatically the extent of cell migration based on automated examination of a series of digital photographs. It was designed specifically to identify the impact of Second Hand Smoke (SHS) on endothelial cell migration but has broad...

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Detalles Bibliográficos
Autores principales: Qin, Jianfeng, Chittenden, Thomas W, Gao, Ling, Pearlman, Justin D
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2005
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC554989/
https://www.ncbi.nlm.nih.gov/pubmed/15743539
http://dx.doi.org/10.1186/1471-2121-6-9
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author Qin, Jianfeng
Chittenden, Thomas W
Gao, Ling
Pearlman, Justin D
author_facet Qin, Jianfeng
Chittenden, Thomas W
Gao, Ling
Pearlman, Justin D
author_sort Qin, Jianfeng
collection PubMed
description BACKGROUND: In this paper, we present and validate a way to measure automatically the extent of cell migration based on automated examination of a series of digital photographs. It was designed specifically to identify the impact of Second Hand Smoke (SHS) on endothelial cell migration but has broader applications. The analysis has two stages: (1) preprocessing of image texture, and (2) migration analysis. RESULTS: The output is a graphic overlay that indicates the front lines of cell migration superimposed on each original image, with automated reporting of the distance traversed vs. time. Expert preference compares to manual placement of leading edge shows complete equivalence of automated vs. manual leading edge definition for cell migration measurement. CONCLUSION: Our method is indistinguishable from careful manual determinations of cell front lines, with the advantages of full automation, objectivity, and speed.
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spelling pubmed-5549892005-03-20 Automated migration analysis based on cell texture: method & reliability Qin, Jianfeng Chittenden, Thomas W Gao, Ling Pearlman, Justin D BMC Cell Biol Software BACKGROUND: In this paper, we present and validate a way to measure automatically the extent of cell migration based on automated examination of a series of digital photographs. It was designed specifically to identify the impact of Second Hand Smoke (SHS) on endothelial cell migration but has broader applications. The analysis has two stages: (1) preprocessing of image texture, and (2) migration analysis. RESULTS: The output is a graphic overlay that indicates the front lines of cell migration superimposed on each original image, with automated reporting of the distance traversed vs. time. Expert preference compares to manual placement of leading edge shows complete equivalence of automated vs. manual leading edge definition for cell migration measurement. CONCLUSION: Our method is indistinguishable from careful manual determinations of cell front lines, with the advantages of full automation, objectivity, and speed. BioMed Central 2005-03-03 /pmc/articles/PMC554989/ /pubmed/15743539 http://dx.doi.org/10.1186/1471-2121-6-9 Text en Copyright © 2005 Qin et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software
Qin, Jianfeng
Chittenden, Thomas W
Gao, Ling
Pearlman, Justin D
Automated migration analysis based on cell texture: method & reliability
title Automated migration analysis based on cell texture: method & reliability
title_full Automated migration analysis based on cell texture: method & reliability
title_fullStr Automated migration analysis based on cell texture: method & reliability
title_full_unstemmed Automated migration analysis based on cell texture: method & reliability
title_short Automated migration analysis based on cell texture: method & reliability
title_sort automated migration analysis based on cell texture: method & reliability
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC554989/
https://www.ncbi.nlm.nih.gov/pubmed/15743539
http://dx.doi.org/10.1186/1471-2121-6-9
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