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Automated migration analysis based on cell texture: method & reliability
BACKGROUND: In this paper, we present and validate a way to measure automatically the extent of cell migration based on automated examination of a series of digital photographs. It was designed specifically to identify the impact of Second Hand Smoke (SHS) on endothelial cell migration but has broad...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2005
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC554989/ https://www.ncbi.nlm.nih.gov/pubmed/15743539 http://dx.doi.org/10.1186/1471-2121-6-9 |
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author | Qin, Jianfeng Chittenden, Thomas W Gao, Ling Pearlman, Justin D |
author_facet | Qin, Jianfeng Chittenden, Thomas W Gao, Ling Pearlman, Justin D |
author_sort | Qin, Jianfeng |
collection | PubMed |
description | BACKGROUND: In this paper, we present and validate a way to measure automatically the extent of cell migration based on automated examination of a series of digital photographs. It was designed specifically to identify the impact of Second Hand Smoke (SHS) on endothelial cell migration but has broader applications. The analysis has two stages: (1) preprocessing of image texture, and (2) migration analysis. RESULTS: The output is a graphic overlay that indicates the front lines of cell migration superimposed on each original image, with automated reporting of the distance traversed vs. time. Expert preference compares to manual placement of leading edge shows complete equivalence of automated vs. manual leading edge definition for cell migration measurement. CONCLUSION: Our method is indistinguishable from careful manual determinations of cell front lines, with the advantages of full automation, objectivity, and speed. |
format | Text |
id | pubmed-554989 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2005 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-5549892005-03-20 Automated migration analysis based on cell texture: method & reliability Qin, Jianfeng Chittenden, Thomas W Gao, Ling Pearlman, Justin D BMC Cell Biol Software BACKGROUND: In this paper, we present and validate a way to measure automatically the extent of cell migration based on automated examination of a series of digital photographs. It was designed specifically to identify the impact of Second Hand Smoke (SHS) on endothelial cell migration but has broader applications. The analysis has two stages: (1) preprocessing of image texture, and (2) migration analysis. RESULTS: The output is a graphic overlay that indicates the front lines of cell migration superimposed on each original image, with automated reporting of the distance traversed vs. time. Expert preference compares to manual placement of leading edge shows complete equivalence of automated vs. manual leading edge definition for cell migration measurement. CONCLUSION: Our method is indistinguishable from careful manual determinations of cell front lines, with the advantages of full automation, objectivity, and speed. BioMed Central 2005-03-03 /pmc/articles/PMC554989/ /pubmed/15743539 http://dx.doi.org/10.1186/1471-2121-6-9 Text en Copyright © 2005 Qin et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Software Qin, Jianfeng Chittenden, Thomas W Gao, Ling Pearlman, Justin D Automated migration analysis based on cell texture: method & reliability |
title | Automated migration analysis based on cell texture: method & reliability |
title_full | Automated migration analysis based on cell texture: method & reliability |
title_fullStr | Automated migration analysis based on cell texture: method & reliability |
title_full_unstemmed | Automated migration analysis based on cell texture: method & reliability |
title_short | Automated migration analysis based on cell texture: method & reliability |
title_sort | automated migration analysis based on cell texture: method & reliability |
topic | Software |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC554989/ https://www.ncbi.nlm.nih.gov/pubmed/15743539 http://dx.doi.org/10.1186/1471-2121-6-9 |
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