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Monte Carlo simulation of a statistical mechanical model of multiple protein sequence alignment

A grand canonical Monte Carlo (MC) algorithm is presented for studying the lattice gas model (LGM) of multiple protein sequence alignment, which coherently combines long-range interactions and variable-length insertions. MC simulations are used for both parameter optimization of the model and produc...

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Detalles Bibliográficos
Autor principal: Kinjo, Akira R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Biophysical Society of Japan (BSJ) 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5551269/
https://www.ncbi.nlm.nih.gov/pubmed/28828285
http://dx.doi.org/10.2142/biophysico.14.0_99