Whole-Genome De Novo Sequencing of the Lignin-Degrading Wood Rot Fungus Phanerochaete chrysosporium (ATCC 20696)

Phanerochaete chrysosporium (ATCC 20696) has a catabolic ability to degrade lignin. Here, we report whole-genome sequencing used to identify genes related to lignin modification. We determined the 39-Mb draft genome sequence of this fungus, comprising 13,560 predicted gene models. Gene annotation pr...

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Detalles Bibliográficos
Autores principales: Hong, Chang-Young, Lee, Su-Yeon, Ryu, Sun-Hwa, Lee, Sung-Suk, Kim, Myungkil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2017
Materias:
Eukaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5552983/
https://www.ncbi.nlm.nih.gov/pubmed/28798174
http://dx.doi.org/10.1128/genomeA.00731-17
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author Hong, Chang-Young
Lee, Su-Yeon
Ryu, Sun-Hwa
Lee, Sung-Suk
Kim, Myungkil
author_facet Hong, Chang-Young
Lee, Su-Yeon
Ryu, Sun-Hwa
Lee, Sung-Suk
Kim, Myungkil
author_sort Hong, Chang-Young
collection PubMed
description Phanerochaete chrysosporium (ATCC 20696) has a catabolic ability to degrade lignin. Here, we report whole-genome sequencing used to identify genes related to lignin modification. We determined the 39-Mb draft genome sequence of this fungus, comprising 13,560 predicted gene models. Gene annotation provided crucial information about the location and function of protein-encoding genes.
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spelling pubmed-55529832017-08-25 Whole-Genome De Novo Sequencing of the Lignin-Degrading Wood Rot Fungus Phanerochaete chrysosporium (ATCC 20696) Hong, Chang-Young Lee, Su-Yeon Ryu, Sun-Hwa Lee, Sung-Suk Kim, Myungkil Genome Announc Eukaryotes Phanerochaete chrysosporium (ATCC 20696) has a catabolic ability to degrade lignin. Here, we report whole-genome sequencing used to identify genes related to lignin modification. We determined the 39-Mb draft genome sequence of this fungus, comprising 13,560 predicted gene models. Gene annotation provided crucial information about the location and function of protein-encoding genes. American Society for Microbiology 2017-08-10 /pmc/articles/PMC5552983/ /pubmed/28798174 http://dx.doi.org/10.1128/genomeA.00731-17 Text en Copyright © 2017 Hong et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Eukaryotes
Hong, Chang-Young
Lee, Su-Yeon
Ryu, Sun-Hwa
Lee, Sung-Suk
Kim, Myungkil
Whole-Genome De Novo Sequencing of the Lignin-Degrading Wood Rot Fungus Phanerochaete chrysosporium (ATCC 20696)
title Whole-Genome De Novo Sequencing of the Lignin-Degrading Wood Rot Fungus Phanerochaete chrysosporium (ATCC 20696)
title_full Whole-Genome De Novo Sequencing of the Lignin-Degrading Wood Rot Fungus Phanerochaete chrysosporium (ATCC 20696)
title_fullStr Whole-Genome De Novo Sequencing of the Lignin-Degrading Wood Rot Fungus Phanerochaete chrysosporium (ATCC 20696)
title_full_unstemmed Whole-Genome De Novo Sequencing of the Lignin-Degrading Wood Rot Fungus Phanerochaete chrysosporium (ATCC 20696)
title_short Whole-Genome De Novo Sequencing of the Lignin-Degrading Wood Rot Fungus Phanerochaete chrysosporium (ATCC 20696)
title_sort whole-genome de novo sequencing of the lignin-degrading wood rot fungus phanerochaete chrysosporium (atcc 20696)
topic Eukaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5552983/
https://www.ncbi.nlm.nih.gov/pubmed/28798174
http://dx.doi.org/10.1128/genomeA.00731-17
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