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The pattern of KRAS mutations in metastatic colorectal cancer: a retrospective audit from Sri Lanka

OBJECTIVE: Activating mutations in the KRAS gene, found in approximately 53% of metastatic colorectal cancer (mCRC) cases, can render epidermal growth factor receptor (EGFR) inhibitors ineffective. Regional differences in these mutations have been reported. This is the first study which aims to desc...

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Autores principales: Sirisena, Nirmala Dushyanthi, Deen, Kemal, Mandawala, Dayupathi Eranda Nipunika, Herath, Pumindu, Dissanayake, Vajira Harshadeva Weerabaddana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5553606/
https://www.ncbi.nlm.nih.gov/pubmed/28797274
http://dx.doi.org/10.1186/s13104-017-2731-5
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author Sirisena, Nirmala Dushyanthi
Deen, Kemal
Mandawala, Dayupathi Eranda Nipunika
Herath, Pumindu
Dissanayake, Vajira Harshadeva Weerabaddana
author_facet Sirisena, Nirmala Dushyanthi
Deen, Kemal
Mandawala, Dayupathi Eranda Nipunika
Herath, Pumindu
Dissanayake, Vajira Harshadeva Weerabaddana
author_sort Sirisena, Nirmala Dushyanthi
collection PubMed
description OBJECTIVE: Activating mutations in the KRAS gene, found in approximately 53% of metastatic colorectal cancer (mCRC) cases, can render epidermal growth factor receptor (EGFR) inhibitors ineffective. Regional differences in these mutations have been reported. This is the first study which aims to describe the pattern of KRAS mutations in a Sri Lankan cohort of mCRC patients. RESULTS: The KRAS genotypes detected in mCRC patients which have been maintained in an anonymized database were retrospectively analyzed. Of the 108 colorectal tissue samples tested, 25 (23.0%) had KRAS mutations. Overall, there were 68 (63.0%) males and 40 (37.0%) females. Among the KRAS positive cases, there were 14 (56.0%) males and 11 (44.0%) females. Their age distribution ranged from 29 to 85 years with a median age of 61 years. There were 15 patients (60.0%) with point mutations in codon 12 while 10 (40.0%) had a single mutation in codon 13. The most common KRAS mutation identified was p.Gly13Asp (40.0%), followed by p.Gly12Val (24.0%). Other mutations included p.Gly12Cys (12.0%), p.Gly12Ser (12.0%), p.Gly12Asp (8.0%), and p.Gly12Arg (4.0%). The codon 13 mutation was a G>A transition (40.0%), while G>T transversions (32.0%), G>A transitions (24.0%), and G>C transversions (4.0%) were found in the codon 12 mutations. The frequency of KRAS mutations was similar to that reported for Asian patients. However, in contrast to several published studies, the G>A transition in codon 12 (c.35G>A; p.Gly12Asp), was not the most common mutation within codon 12 in our cohort. This may be a reflection of the genetic heterogeneity in the pattern of KRAS mutations in mCRC patients but valid conclusions cannot be drawn from these preliminary findings due to the small size of the study sample.
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spelling pubmed-55536062017-08-15 The pattern of KRAS mutations in metastatic colorectal cancer: a retrospective audit from Sri Lanka Sirisena, Nirmala Dushyanthi Deen, Kemal Mandawala, Dayupathi Eranda Nipunika Herath, Pumindu Dissanayake, Vajira Harshadeva Weerabaddana BMC Res Notes Research Note OBJECTIVE: Activating mutations in the KRAS gene, found in approximately 53% of metastatic colorectal cancer (mCRC) cases, can render epidermal growth factor receptor (EGFR) inhibitors ineffective. Regional differences in these mutations have been reported. This is the first study which aims to describe the pattern of KRAS mutations in a Sri Lankan cohort of mCRC patients. RESULTS: The KRAS genotypes detected in mCRC patients which have been maintained in an anonymized database were retrospectively analyzed. Of the 108 colorectal tissue samples tested, 25 (23.0%) had KRAS mutations. Overall, there were 68 (63.0%) males and 40 (37.0%) females. Among the KRAS positive cases, there were 14 (56.0%) males and 11 (44.0%) females. Their age distribution ranged from 29 to 85 years with a median age of 61 years. There were 15 patients (60.0%) with point mutations in codon 12 while 10 (40.0%) had a single mutation in codon 13. The most common KRAS mutation identified was p.Gly13Asp (40.0%), followed by p.Gly12Val (24.0%). Other mutations included p.Gly12Cys (12.0%), p.Gly12Ser (12.0%), p.Gly12Asp (8.0%), and p.Gly12Arg (4.0%). The codon 13 mutation was a G>A transition (40.0%), while G>T transversions (32.0%), G>A transitions (24.0%), and G>C transversions (4.0%) were found in the codon 12 mutations. The frequency of KRAS mutations was similar to that reported for Asian patients. However, in contrast to several published studies, the G>A transition in codon 12 (c.35G>A; p.Gly12Asp), was not the most common mutation within codon 12 in our cohort. This may be a reflection of the genetic heterogeneity in the pattern of KRAS mutations in mCRC patients but valid conclusions cannot be drawn from these preliminary findings due to the small size of the study sample. BioMed Central 2017-08-10 /pmc/articles/PMC5553606/ /pubmed/28797274 http://dx.doi.org/10.1186/s13104-017-2731-5 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Note
Sirisena, Nirmala Dushyanthi
Deen, Kemal
Mandawala, Dayupathi Eranda Nipunika
Herath, Pumindu
Dissanayake, Vajira Harshadeva Weerabaddana
The pattern of KRAS mutations in metastatic colorectal cancer: a retrospective audit from Sri Lanka
title The pattern of KRAS mutations in metastatic colorectal cancer: a retrospective audit from Sri Lanka
title_full The pattern of KRAS mutations in metastatic colorectal cancer: a retrospective audit from Sri Lanka
title_fullStr The pattern of KRAS mutations in metastatic colorectal cancer: a retrospective audit from Sri Lanka
title_full_unstemmed The pattern of KRAS mutations in metastatic colorectal cancer: a retrospective audit from Sri Lanka
title_short The pattern of KRAS mutations in metastatic colorectal cancer: a retrospective audit from Sri Lanka
title_sort pattern of kras mutations in metastatic colorectal cancer: a retrospective audit from sri lanka
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5553606/
https://www.ncbi.nlm.nih.gov/pubmed/28797274
http://dx.doi.org/10.1186/s13104-017-2731-5
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