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The integrative metabolomic-transcriptomic landscape of glioblastome multiforme

The purpose of this study was to map the landscape of metabolic-transcriptional alterations in glioblastoma multiforme. Omic-datasets were acquired by metabolic profiling (1D-NMR spectroscopy n=33 Patient) and transcriptomic profiling (n=48 Patients). Both datasets were analyzed by integrative netwo...

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Autores principales: Heiland, Dieter Henrik, Wörner, Jakob, Haaker, Jan Gerrit, Delev, Daniel, Pompe, Nils, Mercas, Bianca, Franco, Pamela, Gäbelein, Annette, Heynckes, Sabrina, Pfeifer, Dietmar, Weber, Stefan, Mader, Irina, Schnell, Oliver
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5564759/
https://www.ncbi.nlm.nih.gov/pubmed/28380457
http://dx.doi.org/10.18632/oncotarget.16544
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author Heiland, Dieter Henrik
Wörner, Jakob
Haaker, Jan Gerrit
Delev, Daniel
Pompe, Nils
Mercas, Bianca
Franco, Pamela
Gäbelein, Annette
Heynckes, Sabrina
Pfeifer, Dietmar
Weber, Stefan
Mader, Irina
Schnell, Oliver
author_facet Heiland, Dieter Henrik
Wörner, Jakob
Haaker, Jan Gerrit
Delev, Daniel
Pompe, Nils
Mercas, Bianca
Franco, Pamela
Gäbelein, Annette
Heynckes, Sabrina
Pfeifer, Dietmar
Weber, Stefan
Mader, Irina
Schnell, Oliver
author_sort Heiland, Dieter Henrik
collection PubMed
description The purpose of this study was to map the landscape of metabolic-transcriptional alterations in glioblastoma multiforme. Omic-datasets were acquired by metabolic profiling (1D-NMR spectroscopy n=33 Patient) and transcriptomic profiling (n=48 Patients). Both datasets were analyzed by integrative network modeling. The computed model concluded in four different metabolic-transcriptomic signatures containing: oligodendrocytic differentiation, cell-cycle functions, immune response and hypoxia. These clusters were found being distinguished by individual metabolism and distinct transcriptional programs. The study highlighted the association between metabolism and hallmarks of oncogenic signaling such as cell-cycle alterations, immune escape mechanism and other cancer pathway alterations. In conclusion, this study showed the strong influence of metabolic alterations in the wide scope of oncogenic transcriptional alterations.
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spelling pubmed-55647592017-08-23 The integrative metabolomic-transcriptomic landscape of glioblastome multiforme Heiland, Dieter Henrik Wörner, Jakob Haaker, Jan Gerrit Delev, Daniel Pompe, Nils Mercas, Bianca Franco, Pamela Gäbelein, Annette Heynckes, Sabrina Pfeifer, Dietmar Weber, Stefan Mader, Irina Schnell, Oliver Oncotarget Research Paper The purpose of this study was to map the landscape of metabolic-transcriptional alterations in glioblastoma multiforme. Omic-datasets were acquired by metabolic profiling (1D-NMR spectroscopy n=33 Patient) and transcriptomic profiling (n=48 Patients). Both datasets were analyzed by integrative network modeling. The computed model concluded in four different metabolic-transcriptomic signatures containing: oligodendrocytic differentiation, cell-cycle functions, immune response and hypoxia. These clusters were found being distinguished by individual metabolism and distinct transcriptional programs. The study highlighted the association between metabolism and hallmarks of oncogenic signaling such as cell-cycle alterations, immune escape mechanism and other cancer pathway alterations. In conclusion, this study showed the strong influence of metabolic alterations in the wide scope of oncogenic transcriptional alterations. Impact Journals LLC 2017-03-24 /pmc/articles/PMC5564759/ /pubmed/28380457 http://dx.doi.org/10.18632/oncotarget.16544 Text en Copyright: © 2017 Heiland et al. http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Research Paper
Heiland, Dieter Henrik
Wörner, Jakob
Haaker, Jan Gerrit
Delev, Daniel
Pompe, Nils
Mercas, Bianca
Franco, Pamela
Gäbelein, Annette
Heynckes, Sabrina
Pfeifer, Dietmar
Weber, Stefan
Mader, Irina
Schnell, Oliver
The integrative metabolomic-transcriptomic landscape of glioblastome multiforme
title The integrative metabolomic-transcriptomic landscape of glioblastome multiforme
title_full The integrative metabolomic-transcriptomic landscape of glioblastome multiforme
title_fullStr The integrative metabolomic-transcriptomic landscape of glioblastome multiforme
title_full_unstemmed The integrative metabolomic-transcriptomic landscape of glioblastome multiforme
title_short The integrative metabolomic-transcriptomic landscape of glioblastome multiforme
title_sort integrative metabolomic-transcriptomic landscape of glioblastome multiforme
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5564759/
https://www.ncbi.nlm.nih.gov/pubmed/28380457
http://dx.doi.org/10.18632/oncotarget.16544
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