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The integrative metabolomic-transcriptomic landscape of glioblastome multiforme
The purpose of this study was to map the landscape of metabolic-transcriptional alterations in glioblastoma multiforme. Omic-datasets were acquired by metabolic profiling (1D-NMR spectroscopy n=33 Patient) and transcriptomic profiling (n=48 Patients). Both datasets were analyzed by integrative netwo...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5564759/ https://www.ncbi.nlm.nih.gov/pubmed/28380457 http://dx.doi.org/10.18632/oncotarget.16544 |
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author | Heiland, Dieter Henrik Wörner, Jakob Haaker, Jan Gerrit Delev, Daniel Pompe, Nils Mercas, Bianca Franco, Pamela Gäbelein, Annette Heynckes, Sabrina Pfeifer, Dietmar Weber, Stefan Mader, Irina Schnell, Oliver |
author_facet | Heiland, Dieter Henrik Wörner, Jakob Haaker, Jan Gerrit Delev, Daniel Pompe, Nils Mercas, Bianca Franco, Pamela Gäbelein, Annette Heynckes, Sabrina Pfeifer, Dietmar Weber, Stefan Mader, Irina Schnell, Oliver |
author_sort | Heiland, Dieter Henrik |
collection | PubMed |
description | The purpose of this study was to map the landscape of metabolic-transcriptional alterations in glioblastoma multiforme. Omic-datasets were acquired by metabolic profiling (1D-NMR spectroscopy n=33 Patient) and transcriptomic profiling (n=48 Patients). Both datasets were analyzed by integrative network modeling. The computed model concluded in four different metabolic-transcriptomic signatures containing: oligodendrocytic differentiation, cell-cycle functions, immune response and hypoxia. These clusters were found being distinguished by individual metabolism and distinct transcriptional programs. The study highlighted the association between metabolism and hallmarks of oncogenic signaling such as cell-cycle alterations, immune escape mechanism and other cancer pathway alterations. In conclusion, this study showed the strong influence of metabolic alterations in the wide scope of oncogenic transcriptional alterations. |
format | Online Article Text |
id | pubmed-5564759 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-55647592017-08-23 The integrative metabolomic-transcriptomic landscape of glioblastome multiforme Heiland, Dieter Henrik Wörner, Jakob Haaker, Jan Gerrit Delev, Daniel Pompe, Nils Mercas, Bianca Franco, Pamela Gäbelein, Annette Heynckes, Sabrina Pfeifer, Dietmar Weber, Stefan Mader, Irina Schnell, Oliver Oncotarget Research Paper The purpose of this study was to map the landscape of metabolic-transcriptional alterations in glioblastoma multiforme. Omic-datasets were acquired by metabolic profiling (1D-NMR spectroscopy n=33 Patient) and transcriptomic profiling (n=48 Patients). Both datasets were analyzed by integrative network modeling. The computed model concluded in four different metabolic-transcriptomic signatures containing: oligodendrocytic differentiation, cell-cycle functions, immune response and hypoxia. These clusters were found being distinguished by individual metabolism and distinct transcriptional programs. The study highlighted the association between metabolism and hallmarks of oncogenic signaling such as cell-cycle alterations, immune escape mechanism and other cancer pathway alterations. In conclusion, this study showed the strong influence of metabolic alterations in the wide scope of oncogenic transcriptional alterations. Impact Journals LLC 2017-03-24 /pmc/articles/PMC5564759/ /pubmed/28380457 http://dx.doi.org/10.18632/oncotarget.16544 Text en Copyright: © 2017 Heiland et al. http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Research Paper Heiland, Dieter Henrik Wörner, Jakob Haaker, Jan Gerrit Delev, Daniel Pompe, Nils Mercas, Bianca Franco, Pamela Gäbelein, Annette Heynckes, Sabrina Pfeifer, Dietmar Weber, Stefan Mader, Irina Schnell, Oliver The integrative metabolomic-transcriptomic landscape of glioblastome multiforme |
title | The integrative metabolomic-transcriptomic landscape of glioblastome multiforme |
title_full | The integrative metabolomic-transcriptomic landscape of glioblastome multiforme |
title_fullStr | The integrative metabolomic-transcriptomic landscape of glioblastome multiforme |
title_full_unstemmed | The integrative metabolomic-transcriptomic landscape of glioblastome multiforme |
title_short | The integrative metabolomic-transcriptomic landscape of glioblastome multiforme |
title_sort | integrative metabolomic-transcriptomic landscape of glioblastome multiforme |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5564759/ https://www.ncbi.nlm.nih.gov/pubmed/28380457 http://dx.doi.org/10.18632/oncotarget.16544 |
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