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A gene expression atlas of adult Schistosoma mansoni and their gonads

RNA-Seq has proven excellence in providing information about the regulation and transcript levels of genes. We used this method for profiling genes in the flatworm Schistosoma mansoni. This parasite causes schistosomiasis, an infectious disease of global importance for human and animals. The patholo...

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Autores principales: Lu, Zhigang, Sessler, Florian, Holroyd, Nancy, Hahnel, Steffen, Quack, Thomas, Berriman, Matthew, Grevelding, Christoph G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566097/
https://www.ncbi.nlm.nih.gov/pubmed/28829433
http://dx.doi.org/10.1038/sdata.2017.118
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author Lu, Zhigang
Sessler, Florian
Holroyd, Nancy
Hahnel, Steffen
Quack, Thomas
Berriman, Matthew
Grevelding, Christoph G.
author_facet Lu, Zhigang
Sessler, Florian
Holroyd, Nancy
Hahnel, Steffen
Quack, Thomas
Berriman, Matthew
Grevelding, Christoph G.
author_sort Lu, Zhigang
collection PubMed
description RNA-Seq has proven excellence in providing information about the regulation and transcript levels of genes. We used this method for profiling genes in the flatworm Schistosoma mansoni. This parasite causes schistosomiasis, an infectious disease of global importance for human and animals. The pathology of schistosomiasis is associated with the eggs, which are synthesized as a final consequence of male and female adults pairing. The male induces processes in the female that lead to the full development of its gonads as a prerequisite for egg production. Unpaired females remain sexually immature. Based on an organ-isolation method we obtained gonad tissue for RNA extraction from paired and unpaired schistosomes, with whole adults included as controls. From a total of 23 samples, we used high-throughput cDNA sequencing (RNA-Seq) on the Illumina platform to profile gene expression between genders and tissues, with and without pairing influence. The data obtained provide a wealth of information on the reproduction biology of schistosomes and a rich resource for exploitation through basic and applied research activities.
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spelling pubmed-55660972017-08-25 A gene expression atlas of adult Schistosoma mansoni and their gonads Lu, Zhigang Sessler, Florian Holroyd, Nancy Hahnel, Steffen Quack, Thomas Berriman, Matthew Grevelding, Christoph G. Sci Data Data Descriptor RNA-Seq has proven excellence in providing information about the regulation and transcript levels of genes. We used this method for profiling genes in the flatworm Schistosoma mansoni. This parasite causes schistosomiasis, an infectious disease of global importance for human and animals. The pathology of schistosomiasis is associated with the eggs, which are synthesized as a final consequence of male and female adults pairing. The male induces processes in the female that lead to the full development of its gonads as a prerequisite for egg production. Unpaired females remain sexually immature. Based on an organ-isolation method we obtained gonad tissue for RNA extraction from paired and unpaired schistosomes, with whole adults included as controls. From a total of 23 samples, we used high-throughput cDNA sequencing (RNA-Seq) on the Illumina platform to profile gene expression between genders and tissues, with and without pairing influence. The data obtained provide a wealth of information on the reproduction biology of schistosomes and a rich resource for exploitation through basic and applied research activities. Nature Publishing Group 2017-08-22 /pmc/articles/PMC5566097/ /pubmed/28829433 http://dx.doi.org/10.1038/sdata.2017.118 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files made available in this article.
spellingShingle Data Descriptor
Lu, Zhigang
Sessler, Florian
Holroyd, Nancy
Hahnel, Steffen
Quack, Thomas
Berriman, Matthew
Grevelding, Christoph G.
A gene expression atlas of adult Schistosoma mansoni and their gonads
title A gene expression atlas of adult Schistosoma mansoni and their gonads
title_full A gene expression atlas of adult Schistosoma mansoni and their gonads
title_fullStr A gene expression atlas of adult Schistosoma mansoni and their gonads
title_full_unstemmed A gene expression atlas of adult Schistosoma mansoni and their gonads
title_short A gene expression atlas of adult Schistosoma mansoni and their gonads
title_sort gene expression atlas of adult schistosoma mansoni and their gonads
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566097/
https://www.ncbi.nlm.nih.gov/pubmed/28829433
http://dx.doi.org/10.1038/sdata.2017.118
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