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Link predication based on matrix factorization by fusion of multi class organizations of the network
Link predication aims at forecasting the latent or unobserved edges in the complex networks and has a wide range of applications in reality. Almost existing methods and models only take advantage of one class organization of the networks, which always lose important information hidden in other organ...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566345/ https://www.ncbi.nlm.nih.gov/pubmed/28827693 http://dx.doi.org/10.1038/s41598-017-09081-9 |
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author | Jiao, Pengfei Cai, Fei Feng, Yiding Wang, Wenjun |
author_facet | Jiao, Pengfei Cai, Fei Feng, Yiding Wang, Wenjun |
author_sort | Jiao, Pengfei |
collection | PubMed |
description | Link predication aims at forecasting the latent or unobserved edges in the complex networks and has a wide range of applications in reality. Almost existing methods and models only take advantage of one class organization of the networks, which always lose important information hidden in other organizations of the network. In this paper, we propose a link predication framework which makes the best of the structure of networks in different level of organizations based on nonnegative matrix factorization, which is called NMF (3) here. We first map the observed network into another space by kernel functions, which could get the different order organizations. Then we combine the adjacency matrix of the network with one of other organizations, which makes us obtain the objective function of our framework for link predication based on the nonnegative matrix factorization. Third, we derive an iterative algorithm to optimize the objective function, which converges to a local optimum, and we propose a fast optimization strategy for large networks. Lastly, we test the proposed framework based on two kernel functions on a series of real world networks under different sizes of training set, and the experimental results show the feasibility, effectiveness, and competitiveness of the proposed framework. |
format | Online Article Text |
id | pubmed-5566345 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-55663452017-08-23 Link predication based on matrix factorization by fusion of multi class organizations of the network Jiao, Pengfei Cai, Fei Feng, Yiding Wang, Wenjun Sci Rep Article Link predication aims at forecasting the latent or unobserved edges in the complex networks and has a wide range of applications in reality. Almost existing methods and models only take advantage of one class organization of the networks, which always lose important information hidden in other organizations of the network. In this paper, we propose a link predication framework which makes the best of the structure of networks in different level of organizations based on nonnegative matrix factorization, which is called NMF (3) here. We first map the observed network into another space by kernel functions, which could get the different order organizations. Then we combine the adjacency matrix of the network with one of other organizations, which makes us obtain the objective function of our framework for link predication based on the nonnegative matrix factorization. Third, we derive an iterative algorithm to optimize the objective function, which converges to a local optimum, and we propose a fast optimization strategy for large networks. Lastly, we test the proposed framework based on two kernel functions on a series of real world networks under different sizes of training set, and the experimental results show the feasibility, effectiveness, and competitiveness of the proposed framework. Nature Publishing Group UK 2017-08-21 /pmc/articles/PMC5566345/ /pubmed/28827693 http://dx.doi.org/10.1038/s41598-017-09081-9 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Jiao, Pengfei Cai, Fei Feng, Yiding Wang, Wenjun Link predication based on matrix factorization by fusion of multi class organizations of the network |
title | Link predication based on matrix factorization by fusion of multi class organizations of the network |
title_full | Link predication based on matrix factorization by fusion of multi class organizations of the network |
title_fullStr | Link predication based on matrix factorization by fusion of multi class organizations of the network |
title_full_unstemmed | Link predication based on matrix factorization by fusion of multi class organizations of the network |
title_short | Link predication based on matrix factorization by fusion of multi class organizations of the network |
title_sort | link predication based on matrix factorization by fusion of multi class organizations of the network |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566345/ https://www.ncbi.nlm.nih.gov/pubmed/28827693 http://dx.doi.org/10.1038/s41598-017-09081-9 |
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