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Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography

For the first time, the three-dimensional (3D) internal structure of naturally produced Didymosphenia geminata frustules were nondestructively visualized at sub-100 nm resolution. The well-optimized hierarchical structures of these natural organisms provide insight that is needed to design novel, en...

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Autores principales: Zgłobicka, Izabela, Li, Qiong, Gluch, Jürgen, Płocińska, Magdalena, Noga, Teresa, Dobosz, Romuald, Szoszkiewicz, Robert, Witkowski, Andrzej, Zschech, Ehrenfried, Kurzydłowski, Krzysztof J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5567275/
https://www.ncbi.nlm.nih.gov/pubmed/28831062
http://dx.doi.org/10.1038/s41598-017-08960-5
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author Zgłobicka, Izabela
Li, Qiong
Gluch, Jürgen
Płocińska, Magdalena
Noga, Teresa
Dobosz, Romuald
Szoszkiewicz, Robert
Witkowski, Andrzej
Zschech, Ehrenfried
Kurzydłowski, Krzysztof J.
author_facet Zgłobicka, Izabela
Li, Qiong
Gluch, Jürgen
Płocińska, Magdalena
Noga, Teresa
Dobosz, Romuald
Szoszkiewicz, Robert
Witkowski, Andrzej
Zschech, Ehrenfried
Kurzydłowski, Krzysztof J.
author_sort Zgłobicka, Izabela
collection PubMed
description For the first time, the three-dimensional (3D) internal structure of naturally produced Didymosphenia geminata frustules were nondestructively visualized at sub-100 nm resolution. The well-optimized hierarchical structures of these natural organisms provide insight that is needed to design novel, environmentally friendly functional materials. Diatoms, which are widely distributed in freshwater, seawater and wet soils, are well known for their intricate, siliceous cell walls called ‘frustules’. Each type of diatom has a specific morphology with various pores, ribs, minute spines, marginal ridges and elevations. In this paper, the visualization is performed using nondestructive nano X-ray computed tomography (nano-XCT). Arbitrary cross-sections through the frustules, which can be extracted from the nano-XCT 3D data set for each direction, are validated via the destructive focused ion beam (FIB) cross-sectioning of regions of interest (ROIs) and subsequent observation by scanning electron microscopy (SEM). These 3D data are essential for understanding the functionality and potential applications of diatom cells.
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spelling pubmed-55672752017-09-01 Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography Zgłobicka, Izabela Li, Qiong Gluch, Jürgen Płocińska, Magdalena Noga, Teresa Dobosz, Romuald Szoszkiewicz, Robert Witkowski, Andrzej Zschech, Ehrenfried Kurzydłowski, Krzysztof J. Sci Rep Article For the first time, the three-dimensional (3D) internal structure of naturally produced Didymosphenia geminata frustules were nondestructively visualized at sub-100 nm resolution. The well-optimized hierarchical structures of these natural organisms provide insight that is needed to design novel, environmentally friendly functional materials. Diatoms, which are widely distributed in freshwater, seawater and wet soils, are well known for their intricate, siliceous cell walls called ‘frustules’. Each type of diatom has a specific morphology with various pores, ribs, minute spines, marginal ridges and elevations. In this paper, the visualization is performed using nondestructive nano X-ray computed tomography (nano-XCT). Arbitrary cross-sections through the frustules, which can be extracted from the nano-XCT 3D data set for each direction, are validated via the destructive focused ion beam (FIB) cross-sectioning of regions of interest (ROIs) and subsequent observation by scanning electron microscopy (SEM). These 3D data are essential for understanding the functionality and potential applications of diatom cells. Nature Publishing Group UK 2017-08-22 /pmc/articles/PMC5567275/ /pubmed/28831062 http://dx.doi.org/10.1038/s41598-017-08960-5 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Zgłobicka, Izabela
Li, Qiong
Gluch, Jürgen
Płocińska, Magdalena
Noga, Teresa
Dobosz, Romuald
Szoszkiewicz, Robert
Witkowski, Andrzej
Zschech, Ehrenfried
Kurzydłowski, Krzysztof J.
Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography
title Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography
title_full Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography
title_fullStr Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography
title_full_unstemmed Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography
title_short Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography
title_sort visualization of the internal structure of didymosphenia geminata frustules using nano x-ray tomography
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5567275/
https://www.ncbi.nlm.nih.gov/pubmed/28831062
http://dx.doi.org/10.1038/s41598-017-08960-5
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