Cargando…

Rapid amplification of four retrotransposon families promoted speciation and genome size expansion in the genus Panax

Genome duplication and repeat multiplication contribute to genome evolution in plants. Our previous work identified a recent allotetraploidization event and five high-copy LTR retrotransposon (LTR-RT) families PgDel, PgTat, PgAthila, PgTork, and PgOryco in Panax ginseng. Here, using whole-genome seq...

Descripción completa

Detalles Bibliográficos
Autores principales:	Lee, Junki, Waminal, Nomar Espinosa, Choi, Hong-Il, Perumal, Sampath, Lee, Sang-Choon, Nguyen, Van Binh, Jang, Woojong, Kim, Nam-Hoon, Gao, Li-zhi, Yang, Tae-Jin
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2017
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5567358/ https://www.ncbi.nlm.nih.gov/pubmed/28831052 http://dx.doi.org/10.1038/s41598-017-08194-5

Ejemplares similares

Comprehensive comparative analysis of chloroplast genomes from seven Panax species and development of an authentication system based on species-unique single nucleotide polymorphism markers
por: Nguyen, Van Binh, et al.
Publicado: (2020)

A refined Panax ginseng karyotype based on an ultra-high copy 167-bp tandem repeat and ribosomal DNAs
por: Waminal, Nomar Espinosa, et al.
Publicado: (2017)

Genetic diversity among cultivated and wild Panax ginseng populations revealed by high-resolution microsatellite markers
por: Jang, Woojong, et al.
Publicado: (2020)

Dynamic evolution of Panax species
por: Shim, Hyeonah, et al.
Publicado: (2021)

Elucidating the major hidden genomic components of the A, C, and AC genomes and their influence on Brassica evolution
por: Perumal, Sampath, et al.
Publicado: (2017)

Reprogramming of Retrotransposon Activity during Speciation of the Genus Citrus
por: Borredá, Carles, et al.
Publicado: (2019)

Genome and evolution of the shade‐requiring medicinal herb Panax ginseng
por: Kim, Nam‐Hoon, et al.
Publicado: (2018)

Karyotype analysis of Panax ginseng C.A.Meyer, 1843 (Araliaceae) based on rDNA loci and DAPI band distribution
por: Waminal, Nomar Espinosa, et al.
Publicado: (2012)

Mobilization of retrotransposons as a cause of chromosomal diversification and rapid speciation: the case for the Antarctic teleost genus Trematomus
por: Auvinet, J., et al.
Publicado: (2018)

Comprehensive analysis of Panax ginseng root transcriptomes
por: Jayakodi, Murukarthick, et al.
Publicado: (2015)

Randomly Detected Genetically Modified (GM) Maize (Zea mays L.) near a Transport Route Revealed a Fragile 45S rDNA Phenotype
por: Waminal, Nomar Espinosa, et al.
Publicado: (2013)

Chromosomal Mapping of Tandem Repeats Revealed Massive Chromosomal Rearrangements and Insights Into Senna tora Dysploidy
por: Waminal, Nomar Espinosa, et al.
Publicado: (2021)

Ginsenosides in Panax genus and their biosynthesis
por: Hou, Maoqi, et al.
Publicado: (2021)

Transcriptome profiling and comparative analysis of Panax ginseng adventitious roots
por: Jayakodi, Murukarthick, et al.
Publicado: (2014)

Ginseng Genome Database: an open-access platform for genomics of Panax ginseng
por: Jayakodi, Murukarthick, et al.
Publicado: (2018)

Re-exploration of U’s Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences
por: Kim, Chang-Kug, et al.
Publicado: (2018)

Disentangling Crocus Series Verni and Its Polyploids
por: Raca, Irena, et al.
Publicado: (2023)

Modeling the Amplification Dynamics of Human Alu Retrotransposons
por: Hedges, Dale J, et al.
Publicado: (2005)

Induction of T-DNA amplification by retrotransposon-derived sequences
por: Dickinson, Lauren, et al.
Publicado: (2023)

Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species
por: Kim, Kyunghee, et al.
Publicado: (2015)

Metabolomic approach for discrimination of processed ginseng genus (Panax ginseng and Panax quinquefolius) using UPLC-QTOF MS
por: Park, Hee-Won, et al.
Publicado: (2013)

Comparative FISH analysis of Senna tora tandem repeats revealed insights into the chromosome dynamics in Senna
por: Ta, Thanh Dat, et al.
Publicado: (2021)

The complete plastome of Panax stipuleanatus: Comparative and phylogenetic analyses of the genus Panax (Araliaceae)
por: Liu, Changkun, et al.
Publicado: (2018)

The speciation and hybridization history of the genus Salmonella
por: Criscuolo, Alexis, et al.
Publicado: (2019)

The complete mitochondrial genome of Panax ginseng (Apiales, Araliaceae): an important medicinal plant
por: Jang, Woojong, et al.
Publicado: (2021)

Subgenome Discrimination in Brassica and Raphanus Allopolyploids Using Microsatellites
por: Campomayor, Nicole Bon, et al.
Publicado: (2021)

Pathogenesis strategies and regulation of ginsenosides by two species of Ilyonectria in Panax ginseng: power of speciation
por: Farh, Mohamed El-Agamy, et al.
Publicado: (2020)

Massive Expansion of Gypsy-Like Retrotransposons in Microbotryum Fungi
por: Horns, Felix, et al.
Publicado: (2017)

Insertion polymorphisms of SINE200 retrotransposons within speciation islands of Anopheles gambiae molecular forms
por: Santolamazza, Federica, et al.
Publicado: (2008)

Comprehensive Survey of Genetic Diversity in Chloroplast Genomes and 45S nrDNAs within Panax ginseng Species
por: Kim, Kyunghee, et al.
Publicado: (2015)

Amplification Dynamics of Platy-1 Retrotransposons in the Cebidae Platyrrhine Lineage
por: Storer, Jessica M, et al.
Publicado: (2019)

Comparative transcriptome and metabolome analyses of four Panax species explore the dynamics of metabolite biosynthesis
por: Koo, Hyunjin, et al.
Publicado: (2023)

Correlated evolution of LTR retrotransposons and genome size in the genus eleocharis
por: Zedek, František, et al.
Publicado: (2010)

Evidence of genome duplication revealed by sequence analysis of multi-loci expressed sequence tag–simple sequence repeat bands in Panax ginseng Meyer
por: Kim, Nam-Hoon, et al.
Publicado: (2014)

The Role of Retrotransposons in Gene Family Expansions in the Human and Mouse Genomes
por: Janoušek, Václav, et al.
Publicado: (2016)

Till 2018: a survey of biomolecular sequences in genus Panax
por: Boopathi, Vinothini, et al.
Publicado: (2020)

Rapid and Efficient FISH using Pre-Labeled Oligomer Probes
por: Waminal, Nomar Espinosa, et al.
Publicado: (2018)

Structural Diversity of a Novel LTR Retrotransposon, RTPOSON, in the Genus Oryza
por: Hsu, Yu-Chia, et al.
Publicado: (2016)

Retrotransposons Are the Major Contributors to the Expansion of the Drosophila ananassae Muller F Element
por: Leung, Wilson, et al.
Publicado: (2017)

Chromosomal Polymorphism and Speciation: The Case of the Genus Mazama (Cetartiodactyla; Cervidae)
por: Galindo, David Javier, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_0qdmhg2mij7ebksrdq71can0r7