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The EBI search engine: EBI search as a service—making biological data accessible for all

We present an update of the EBI Search engine, an easy-to-use fast text search and indexing system with powerful data navigation and retrieval capabilities. The interconnectivity that exists between data resources at EMBL–EBI provides easy, quick and precise navigation and a better understanding of...

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Detalles Bibliográficos
Autores principales: Park, Young M., Squizzato, Silvano, Buso, Nicola, Gur, Tamer, Lopez, Rodrigo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570174/
https://www.ncbi.nlm.nih.gov/pubmed/28472374
http://dx.doi.org/10.1093/nar/gkx359
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author Park, Young M.
Squizzato, Silvano
Buso, Nicola
Gur, Tamer
Lopez, Rodrigo
author_facet Park, Young M.
Squizzato, Silvano
Buso, Nicola
Gur, Tamer
Lopez, Rodrigo
author_sort Park, Young M.
collection PubMed
description We present an update of the EBI Search engine, an easy-to-use fast text search and indexing system with powerful data navigation and retrieval capabilities. The interconnectivity that exists between data resources at EMBL–EBI provides easy, quick and precise navigation and a better understanding of the relationship between different data types that include nucleotide and protein sequences, genes, gene products, proteins, protein domains, protein families, enzymes and macromolecular structures, as well as the life science literature. EBI Search provides a powerful RESTful API that enables its integration into third-party portals, thus providing ‘Search as a Service’ capabilities, which are the main topic of this article.
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spelling pubmed-55701742017-08-29 The EBI search engine: EBI search as a service—making biological data accessible for all Park, Young M. Squizzato, Silvano Buso, Nicola Gur, Tamer Lopez, Rodrigo Nucleic Acids Res Web Server Issue We present an update of the EBI Search engine, an easy-to-use fast text search and indexing system with powerful data navigation and retrieval capabilities. The interconnectivity that exists between data resources at EMBL–EBI provides easy, quick and precise navigation and a better understanding of the relationship between different data types that include nucleotide and protein sequences, genes, gene products, proteins, protein domains, protein families, enzymes and macromolecular structures, as well as the life science literature. EBI Search provides a powerful RESTful API that enables its integration into third-party portals, thus providing ‘Search as a Service’ capabilities, which are the main topic of this article. Oxford University Press 2017-07-03 2017-05-02 /pmc/articles/PMC5570174/ /pubmed/28472374 http://dx.doi.org/10.1093/nar/gkx359 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Web Server Issue
Park, Young M.
Squizzato, Silvano
Buso, Nicola
Gur, Tamer
Lopez, Rodrigo
The EBI search engine: EBI search as a service—making biological data accessible for all
title The EBI search engine: EBI search as a service—making biological data accessible for all
title_full The EBI search engine: EBI search as a service—making biological data accessible for all
title_fullStr The EBI search engine: EBI search as a service—making biological data accessible for all
title_full_unstemmed The EBI search engine: EBI search as a service—making biological data accessible for all
title_short The EBI search engine: EBI search as a service—making biological data accessible for all
title_sort ebi search engine: ebi search as a service—making biological data accessible for all
topic Web Server Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570174/
https://www.ncbi.nlm.nih.gov/pubmed/28472374
http://dx.doi.org/10.1093/nar/gkx359
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