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The EBI search engine: EBI search as a service—making biological data accessible for all
We present an update of the EBI Search engine, an easy-to-use fast text search and indexing system with powerful data navigation and retrieval capabilities. The interconnectivity that exists between data resources at EMBL–EBI provides easy, quick and precise navigation and a better understanding of...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570174/ https://www.ncbi.nlm.nih.gov/pubmed/28472374 http://dx.doi.org/10.1093/nar/gkx359 |
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author | Park, Young M. Squizzato, Silvano Buso, Nicola Gur, Tamer Lopez, Rodrigo |
author_facet | Park, Young M. Squizzato, Silvano Buso, Nicola Gur, Tamer Lopez, Rodrigo |
author_sort | Park, Young M. |
collection | PubMed |
description | We present an update of the EBI Search engine, an easy-to-use fast text search and indexing system with powerful data navigation and retrieval capabilities. The interconnectivity that exists between data resources at EMBL–EBI provides easy, quick and precise navigation and a better understanding of the relationship between different data types that include nucleotide and protein sequences, genes, gene products, proteins, protein domains, protein families, enzymes and macromolecular structures, as well as the life science literature. EBI Search provides a powerful RESTful API that enables its integration into third-party portals, thus providing ‘Search as a Service’ capabilities, which are the main topic of this article. |
format | Online Article Text |
id | pubmed-5570174 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-55701742017-08-29 The EBI search engine: EBI search as a service—making biological data accessible for all Park, Young M. Squizzato, Silvano Buso, Nicola Gur, Tamer Lopez, Rodrigo Nucleic Acids Res Web Server Issue We present an update of the EBI Search engine, an easy-to-use fast text search and indexing system with powerful data navigation and retrieval capabilities. The interconnectivity that exists between data resources at EMBL–EBI provides easy, quick and precise navigation and a better understanding of the relationship between different data types that include nucleotide and protein sequences, genes, gene products, proteins, protein domains, protein families, enzymes and macromolecular structures, as well as the life science literature. EBI Search provides a powerful RESTful API that enables its integration into third-party portals, thus providing ‘Search as a Service’ capabilities, which are the main topic of this article. Oxford University Press 2017-07-03 2017-05-02 /pmc/articles/PMC5570174/ /pubmed/28472374 http://dx.doi.org/10.1093/nar/gkx359 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Web Server Issue Park, Young M. Squizzato, Silvano Buso, Nicola Gur, Tamer Lopez, Rodrigo The EBI search engine: EBI search as a service—making biological data accessible for all |
title | The EBI search engine: EBI search as a service—making biological data accessible for all |
title_full | The EBI search engine: EBI search as a service—making biological data accessible for all |
title_fullStr | The EBI search engine: EBI search as a service—making biological data accessible for all |
title_full_unstemmed | The EBI search engine: EBI search as a service—making biological data accessible for all |
title_short | The EBI search engine: EBI search as a service—making biological data accessible for all |
title_sort | ebi search engine: ebi search as a service—making biological data accessible for all |
topic | Web Server Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570174/ https://www.ncbi.nlm.nih.gov/pubmed/28472374 http://dx.doi.org/10.1093/nar/gkx359 |
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