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Assessing the accuracy of predictive models for numerical data: Not r nor r(2), why not? Then what?
Assessing the accuracy of predictive models is critical because predictive models have been increasingly used across various disciplines and predictive accuracy determines the quality of resultant predictions. Pearson product-moment correlation coefficient (r) and the coefficient of determination (r...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570302/ https://www.ncbi.nlm.nih.gov/pubmed/28837692 http://dx.doi.org/10.1371/journal.pone.0183250 |
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author | Li, Jin |
author_facet | Li, Jin |
author_sort | Li, Jin |
collection | PubMed |
description | Assessing the accuracy of predictive models is critical because predictive models have been increasingly used across various disciplines and predictive accuracy determines the quality of resultant predictions. Pearson product-moment correlation coefficient (r) and the coefficient of determination (r(2)) are among the most widely used measures for assessing predictive models for numerical data, although they are argued to be biased, insufficient and misleading. In this study, geometrical graphs were used to illustrate what were used in the calculation of r and r(2) and simulations were used to demonstrate the behaviour of r and r(2) and to compare three accuracy measures under various scenarios. Relevant confusions about r and r(2), has been clarified. The calculation of r and r(2) is not based on the differences between the predicted and observed values. The existing error measures suffer various limitations and are unable to tell the accuracy. Variance explained by predictive models based on cross-validation (VEcv) is free of these limitations and is a reliable accuracy measure. Legates and McCabe’s efficiency (E(1)) is also an alternative accuracy measure. The r and r(2) do not measure the accuracy and are incorrect accuracy measures. The existing error measures suffer limitations. VEcv and E(1) are recommended for assessing the accuracy. The applications of these accuracy measures would encourage accuracy-improved predictive models to be developed to generate predictions for evidence-informed decision-making. |
format | Online Article Text |
id | pubmed-5570302 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-55703022017-09-09 Assessing the accuracy of predictive models for numerical data: Not r nor r(2), why not? Then what? Li, Jin PLoS One Research Article Assessing the accuracy of predictive models is critical because predictive models have been increasingly used across various disciplines and predictive accuracy determines the quality of resultant predictions. Pearson product-moment correlation coefficient (r) and the coefficient of determination (r(2)) are among the most widely used measures for assessing predictive models for numerical data, although they are argued to be biased, insufficient and misleading. In this study, geometrical graphs were used to illustrate what were used in the calculation of r and r(2) and simulations were used to demonstrate the behaviour of r and r(2) and to compare three accuracy measures under various scenarios. Relevant confusions about r and r(2), has been clarified. The calculation of r and r(2) is not based on the differences between the predicted and observed values. The existing error measures suffer various limitations and are unable to tell the accuracy. Variance explained by predictive models based on cross-validation (VEcv) is free of these limitations and is a reliable accuracy measure. Legates and McCabe’s efficiency (E(1)) is also an alternative accuracy measure. The r and r(2) do not measure the accuracy and are incorrect accuracy measures. The existing error measures suffer limitations. VEcv and E(1) are recommended for assessing the accuracy. The applications of these accuracy measures would encourage accuracy-improved predictive models to be developed to generate predictions for evidence-informed decision-making. Public Library of Science 2017-08-24 /pmc/articles/PMC5570302/ /pubmed/28837692 http://dx.doi.org/10.1371/journal.pone.0183250 Text en © 2017 Jin Li http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Li, Jin Assessing the accuracy of predictive models for numerical data: Not r nor r(2), why not? Then what? |
title | Assessing the accuracy of predictive models for numerical data: Not r nor r(2), why not? Then what? |
title_full | Assessing the accuracy of predictive models for numerical data: Not r nor r(2), why not? Then what? |
title_fullStr | Assessing the accuracy of predictive models for numerical data: Not r nor r(2), why not? Then what? |
title_full_unstemmed | Assessing the accuracy of predictive models for numerical data: Not r nor r(2), why not? Then what? |
title_short | Assessing the accuracy of predictive models for numerical data: Not r nor r(2), why not? Then what? |
title_sort | assessing the accuracy of predictive models for numerical data: not r nor r(2), why not? then what? |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570302/ https://www.ncbi.nlm.nih.gov/pubmed/28837692 http://dx.doi.org/10.1371/journal.pone.0183250 |
work_keys_str_mv | AT lijin assessingtheaccuracyofpredictivemodelsfornumericaldatanotrnorr2whynotthenwhat |