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Development and validation of a set of six adaptable prognosis prediction (SAP) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: A multicenter case crossover study
BACKGROUND: We aimed to develop an adaptable prognosis prediction model that could be applied at any time point during the treatment course for patients with cancer receiving chemotherapy, by applying time-series real-world big data. METHODS: Between April 2004 and September 2014, 4,997 patients wit...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570326/ https://www.ncbi.nlm.nih.gov/pubmed/28837592 http://dx.doi.org/10.1371/journal.pone.0183291 |
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author | Uneno, Yu Taneishi, Kei Kanai, Masashi Okamoto, Kazuya Yamamoto, Yosuke Yoshioka, Akira Hiramoto, Shuji Nozaki, Akira Nishikawa, Yoshitaka Yamaguchi, Daisuke Tomono, Teruko Nakatsui, Masahiko Baba, Mika Morita, Tatsuya Matsumoto, Shigemi Kuroda, Tomohiro Okuno, Yasushi Muto, Manabu |
author_facet | Uneno, Yu Taneishi, Kei Kanai, Masashi Okamoto, Kazuya Yamamoto, Yosuke Yoshioka, Akira Hiramoto, Shuji Nozaki, Akira Nishikawa, Yoshitaka Yamaguchi, Daisuke Tomono, Teruko Nakatsui, Masahiko Baba, Mika Morita, Tatsuya Matsumoto, Shigemi Kuroda, Tomohiro Okuno, Yasushi Muto, Manabu |
author_sort | Uneno, Yu |
collection | PubMed |
description | BACKGROUND: We aimed to develop an adaptable prognosis prediction model that could be applied at any time point during the treatment course for patients with cancer receiving chemotherapy, by applying time-series real-world big data. METHODS: Between April 2004 and September 2014, 4,997 patients with cancer who had received systemic chemotherapy were registered in a prospective cohort database at the Kyoto University Hospital. Of these, 2,693 patients with a death record were eligible for inclusion and divided into training (n = 1,341) and test (n = 1,352) cohorts. In total, 3,471,521 laboratory data at 115,738 time points, representing 40 laboratory items [e.g., white blood cell counts and albumin (Alb) levels] that were monitored for 1 year before the death event were applied for constructing prognosis prediction models. All possible prediction models comprising three different items from 40 laboratory items ((40)C(3) = 9,880) were generated in the training cohort, and the model selection was performed in the test cohort. The fitness of the selected models was externally validated in the validation cohort from three independent settings. RESULTS: A prognosis prediction model utilizing Alb, lactate dehydrogenase, and neutrophils was selected based on a strong ability to predict death events within 1–6 months and a set of six prediction models corresponding to 1,2, 3, 4, 5, and 6 months was developed. The area under the curve (AUC) ranged from 0.852 for the 1 month model to 0.713 for the 6 month model. External validation supported the performance of these models. CONCLUSION: By applying time-series real-world big data, we successfully developed a set of six adaptable prognosis prediction models for patients with cancer receiving chemotherapy. |
format | Online Article Text |
id | pubmed-5570326 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-55703262017-09-09 Development and validation of a set of six adaptable prognosis prediction (SAP) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: A multicenter case crossover study Uneno, Yu Taneishi, Kei Kanai, Masashi Okamoto, Kazuya Yamamoto, Yosuke Yoshioka, Akira Hiramoto, Shuji Nozaki, Akira Nishikawa, Yoshitaka Yamaguchi, Daisuke Tomono, Teruko Nakatsui, Masahiko Baba, Mika Morita, Tatsuya Matsumoto, Shigemi Kuroda, Tomohiro Okuno, Yasushi Muto, Manabu PLoS One Research Article BACKGROUND: We aimed to develop an adaptable prognosis prediction model that could be applied at any time point during the treatment course for patients with cancer receiving chemotherapy, by applying time-series real-world big data. METHODS: Between April 2004 and September 2014, 4,997 patients with cancer who had received systemic chemotherapy were registered in a prospective cohort database at the Kyoto University Hospital. Of these, 2,693 patients with a death record were eligible for inclusion and divided into training (n = 1,341) and test (n = 1,352) cohorts. In total, 3,471,521 laboratory data at 115,738 time points, representing 40 laboratory items [e.g., white blood cell counts and albumin (Alb) levels] that were monitored for 1 year before the death event were applied for constructing prognosis prediction models. All possible prediction models comprising three different items from 40 laboratory items ((40)C(3) = 9,880) were generated in the training cohort, and the model selection was performed in the test cohort. The fitness of the selected models was externally validated in the validation cohort from three independent settings. RESULTS: A prognosis prediction model utilizing Alb, lactate dehydrogenase, and neutrophils was selected based on a strong ability to predict death events within 1–6 months and a set of six prediction models corresponding to 1,2, 3, 4, 5, and 6 months was developed. The area under the curve (AUC) ranged from 0.852 for the 1 month model to 0.713 for the 6 month model. External validation supported the performance of these models. CONCLUSION: By applying time-series real-world big data, we successfully developed a set of six adaptable prognosis prediction models for patients with cancer receiving chemotherapy. Public Library of Science 2017-08-24 /pmc/articles/PMC5570326/ /pubmed/28837592 http://dx.doi.org/10.1371/journal.pone.0183291 Text en © 2017 Uneno et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Uneno, Yu Taneishi, Kei Kanai, Masashi Okamoto, Kazuya Yamamoto, Yosuke Yoshioka, Akira Hiramoto, Shuji Nozaki, Akira Nishikawa, Yoshitaka Yamaguchi, Daisuke Tomono, Teruko Nakatsui, Masahiko Baba, Mika Morita, Tatsuya Matsumoto, Shigemi Kuroda, Tomohiro Okuno, Yasushi Muto, Manabu Development and validation of a set of six adaptable prognosis prediction (SAP) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: A multicenter case crossover study |
title | Development and validation of a set of six adaptable prognosis prediction (SAP) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: A multicenter case crossover study |
title_full | Development and validation of a set of six adaptable prognosis prediction (SAP) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: A multicenter case crossover study |
title_fullStr | Development and validation of a set of six adaptable prognosis prediction (SAP) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: A multicenter case crossover study |
title_full_unstemmed | Development and validation of a set of six adaptable prognosis prediction (SAP) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: A multicenter case crossover study |
title_short | Development and validation of a set of six adaptable prognosis prediction (SAP) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: A multicenter case crossover study |
title_sort | development and validation of a set of six adaptable prognosis prediction (sap) models based on time-series real-world big data analysis for patients with cancer receiving chemotherapy: a multicenter case crossover study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570326/ https://www.ncbi.nlm.nih.gov/pubmed/28837592 http://dx.doi.org/10.1371/journal.pone.0183291 |
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