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Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene
Bronchopulmonary dysplasia (BPD), the main consequence of prematurity, has a significant heritability, but little is known about predisposing genes. The aim of this study was to identify gene loci predisposing infants to BPD. The initial genome-wide association study (GWAS) included 174 Finnish pret...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5571168/ https://www.ncbi.nlm.nih.gov/pubmed/28839172 http://dx.doi.org/10.1038/s41598-017-08977-w |
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author | Mahlman, Mari Karjalainen, Minna K. Huusko, Johanna M. Andersson, Sture Kari, M. Anneli Tammela, Outi K. T. Sankilampi, Ulla Lehtonen, Liisa Marttila, Riitta H. Bassler, Dirk Poets, Christian F. Lacaze-Masmonteil, Thierry Danan, Claude Delacourt, Christophe Palotie, Aarno Muglia, Louis J. Lavoie, Pascal M. Hadchouel, Alice Rämet, Mika Hallman, Mikko |
author_facet | Mahlman, Mari Karjalainen, Minna K. Huusko, Johanna M. Andersson, Sture Kari, M. Anneli Tammela, Outi K. T. Sankilampi, Ulla Lehtonen, Liisa Marttila, Riitta H. Bassler, Dirk Poets, Christian F. Lacaze-Masmonteil, Thierry Danan, Claude Delacourt, Christophe Palotie, Aarno Muglia, Louis J. Lavoie, Pascal M. Hadchouel, Alice Rämet, Mika Hallman, Mikko |
author_sort | Mahlman, Mari |
collection | PubMed |
description | Bronchopulmonary dysplasia (BPD), the main consequence of prematurity, has a significant heritability, but little is known about predisposing genes. The aim of this study was to identify gene loci predisposing infants to BPD. The initial genome-wide association study (GWAS) included 174 Finnish preterm infants of gestational age 24–30 weeks. Thereafter, the most promising single-nucleotide polymorphisms (SNPs) associated with BPD were genotyped in both Finnish (n = 555) and non-Finnish (n = 388) replication cohorts. Finally, plasma CRP levels from the first week of life and the risk of BPD were assessed. SNP rs11265269, flanking the CRP gene, showed the strongest signal in GWAS (odds ratio [OR] 3.2, p = 3.4 × 10(−6)). This association was nominally replicated in Finnish and French African populations. A number of other SNPs in the CRP region, including rs3093059, had nominal associations with BPD. During the first week of life the elevated plasma levels of CRP predicted the risk of BPD (OR 3.4, p = 2.9 × 10(–4)) and the SNP rs3093059 associated nominally with plasma CRP levels. Finally, SNP rs11265269 was identified as a risk factor of BPD (OR 1.8, p = 5.3 × 10(−5)), independently of the robust antenatal risk factors. As such, in BPD, a potential role for variants near CRP gene is proposed. |
format | Online Article Text |
id | pubmed-5571168 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-55711682017-09-01 Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene Mahlman, Mari Karjalainen, Minna K. Huusko, Johanna M. Andersson, Sture Kari, M. Anneli Tammela, Outi K. T. Sankilampi, Ulla Lehtonen, Liisa Marttila, Riitta H. Bassler, Dirk Poets, Christian F. Lacaze-Masmonteil, Thierry Danan, Claude Delacourt, Christophe Palotie, Aarno Muglia, Louis J. Lavoie, Pascal M. Hadchouel, Alice Rämet, Mika Hallman, Mikko Sci Rep Article Bronchopulmonary dysplasia (BPD), the main consequence of prematurity, has a significant heritability, but little is known about predisposing genes. The aim of this study was to identify gene loci predisposing infants to BPD. The initial genome-wide association study (GWAS) included 174 Finnish preterm infants of gestational age 24–30 weeks. Thereafter, the most promising single-nucleotide polymorphisms (SNPs) associated with BPD were genotyped in both Finnish (n = 555) and non-Finnish (n = 388) replication cohorts. Finally, plasma CRP levels from the first week of life and the risk of BPD were assessed. SNP rs11265269, flanking the CRP gene, showed the strongest signal in GWAS (odds ratio [OR] 3.2, p = 3.4 × 10(−6)). This association was nominally replicated in Finnish and French African populations. A number of other SNPs in the CRP region, including rs3093059, had nominal associations with BPD. During the first week of life the elevated plasma levels of CRP predicted the risk of BPD (OR 3.4, p = 2.9 × 10(–4)) and the SNP rs3093059 associated nominally with plasma CRP levels. Finally, SNP rs11265269 was identified as a risk factor of BPD (OR 1.8, p = 5.3 × 10(−5)), independently of the robust antenatal risk factors. As such, in BPD, a potential role for variants near CRP gene is proposed. Nature Publishing Group UK 2017-08-24 /pmc/articles/PMC5571168/ /pubmed/28839172 http://dx.doi.org/10.1038/s41598-017-08977-w Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Mahlman, Mari Karjalainen, Minna K. Huusko, Johanna M. Andersson, Sture Kari, M. Anneli Tammela, Outi K. T. Sankilampi, Ulla Lehtonen, Liisa Marttila, Riitta H. Bassler, Dirk Poets, Christian F. Lacaze-Masmonteil, Thierry Danan, Claude Delacourt, Christophe Palotie, Aarno Muglia, Louis J. Lavoie, Pascal M. Hadchouel, Alice Rämet, Mika Hallman, Mikko Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene |
title | Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene |
title_full | Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene |
title_fullStr | Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene |
title_full_unstemmed | Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene |
title_short | Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene |
title_sort | genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the crp gene |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5571168/ https://www.ncbi.nlm.nih.gov/pubmed/28839172 http://dx.doi.org/10.1038/s41598-017-08977-w |
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