Cargando…

Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene

Bronchopulmonary dysplasia (BPD), the main consequence of prematurity, has a significant heritability, but little is known about predisposing genes. The aim of this study was to identify gene loci predisposing infants to BPD. The initial genome-wide association study (GWAS) included 174 Finnish pret...

Descripción completa

Detalles Bibliográficos
Autores principales: Mahlman, Mari, Karjalainen, Minna K., Huusko, Johanna M., Andersson, Sture, Kari, M. Anneli, Tammela, Outi K. T., Sankilampi, Ulla, Lehtonen, Liisa, Marttila, Riitta H., Bassler, Dirk, Poets, Christian F., Lacaze-Masmonteil, Thierry, Danan, Claude, Delacourt, Christophe, Palotie, Aarno, Muglia, Louis J., Lavoie, Pascal M., Hadchouel, Alice, Rämet, Mika, Hallman, Mikko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5571168/
https://www.ncbi.nlm.nih.gov/pubmed/28839172
http://dx.doi.org/10.1038/s41598-017-08977-w
_version_ 1783259304324759552
author Mahlman, Mari
Karjalainen, Minna K.
Huusko, Johanna M.
Andersson, Sture
Kari, M. Anneli
Tammela, Outi K. T.
Sankilampi, Ulla
Lehtonen, Liisa
Marttila, Riitta H.
Bassler, Dirk
Poets, Christian F.
Lacaze-Masmonteil, Thierry
Danan, Claude
Delacourt, Christophe
Palotie, Aarno
Muglia, Louis J.
Lavoie, Pascal M.
Hadchouel, Alice
Rämet, Mika
Hallman, Mikko
author_facet Mahlman, Mari
Karjalainen, Minna K.
Huusko, Johanna M.
Andersson, Sture
Kari, M. Anneli
Tammela, Outi K. T.
Sankilampi, Ulla
Lehtonen, Liisa
Marttila, Riitta H.
Bassler, Dirk
Poets, Christian F.
Lacaze-Masmonteil, Thierry
Danan, Claude
Delacourt, Christophe
Palotie, Aarno
Muglia, Louis J.
Lavoie, Pascal M.
Hadchouel, Alice
Rämet, Mika
Hallman, Mikko
author_sort Mahlman, Mari
collection PubMed
description Bronchopulmonary dysplasia (BPD), the main consequence of prematurity, has a significant heritability, but little is known about predisposing genes. The aim of this study was to identify gene loci predisposing infants to BPD. The initial genome-wide association study (GWAS) included 174 Finnish preterm infants of gestational age 24–30 weeks. Thereafter, the most promising single-nucleotide polymorphisms (SNPs) associated with BPD were genotyped in both Finnish (n = 555) and non-Finnish (n = 388) replication cohorts. Finally, plasma CRP levels from the first week of life and the risk of BPD were assessed. SNP rs11265269, flanking the CRP gene, showed the strongest signal in GWAS (odds ratio [OR] 3.2, p = 3.4 × 10(−6)). This association was nominally replicated in Finnish and French African populations. A number of other SNPs in the CRP region, including rs3093059, had nominal associations with BPD. During the first week of life the elevated plasma levels of CRP predicted the risk of BPD (OR 3.4, p = 2.9 × 10(–4)) and the SNP rs3093059 associated nominally with plasma CRP levels. Finally, SNP rs11265269 was identified as a risk factor of BPD (OR 1.8, p = 5.3 × 10(−5)), independently of the robust antenatal risk factors. As such, in BPD, a potential role for variants near CRP gene is proposed.
format Online
Article
Text
id pubmed-5571168
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-55711682017-09-01 Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene Mahlman, Mari Karjalainen, Minna K. Huusko, Johanna M. Andersson, Sture Kari, M. Anneli Tammela, Outi K. T. Sankilampi, Ulla Lehtonen, Liisa Marttila, Riitta H. Bassler, Dirk Poets, Christian F. Lacaze-Masmonteil, Thierry Danan, Claude Delacourt, Christophe Palotie, Aarno Muglia, Louis J. Lavoie, Pascal M. Hadchouel, Alice Rämet, Mika Hallman, Mikko Sci Rep Article Bronchopulmonary dysplasia (BPD), the main consequence of prematurity, has a significant heritability, but little is known about predisposing genes. The aim of this study was to identify gene loci predisposing infants to BPD. The initial genome-wide association study (GWAS) included 174 Finnish preterm infants of gestational age 24–30 weeks. Thereafter, the most promising single-nucleotide polymorphisms (SNPs) associated with BPD were genotyped in both Finnish (n = 555) and non-Finnish (n = 388) replication cohorts. Finally, plasma CRP levels from the first week of life and the risk of BPD were assessed. SNP rs11265269, flanking the CRP gene, showed the strongest signal in GWAS (odds ratio [OR] 3.2, p = 3.4 × 10(−6)). This association was nominally replicated in Finnish and French African populations. A number of other SNPs in the CRP region, including rs3093059, had nominal associations with BPD. During the first week of life the elevated plasma levels of CRP predicted the risk of BPD (OR 3.4, p = 2.9 × 10(–4)) and the SNP rs3093059 associated nominally with plasma CRP levels. Finally, SNP rs11265269 was identified as a risk factor of BPD (OR 1.8, p = 5.3 × 10(−5)), independently of the robust antenatal risk factors. As such, in BPD, a potential role for variants near CRP gene is proposed. Nature Publishing Group UK 2017-08-24 /pmc/articles/PMC5571168/ /pubmed/28839172 http://dx.doi.org/10.1038/s41598-017-08977-w Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Mahlman, Mari
Karjalainen, Minna K.
Huusko, Johanna M.
Andersson, Sture
Kari, M. Anneli
Tammela, Outi K. T.
Sankilampi, Ulla
Lehtonen, Liisa
Marttila, Riitta H.
Bassler, Dirk
Poets, Christian F.
Lacaze-Masmonteil, Thierry
Danan, Claude
Delacourt, Christophe
Palotie, Aarno
Muglia, Louis J.
Lavoie, Pascal M.
Hadchouel, Alice
Rämet, Mika
Hallman, Mikko
Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene
title Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene
title_full Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene
title_fullStr Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene
title_full_unstemmed Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene
title_short Genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the CRP gene
title_sort genome-wide association study of bronchopulmonary dysplasia: a potential role for variants near the crp gene
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5571168/
https://www.ncbi.nlm.nih.gov/pubmed/28839172
http://dx.doi.org/10.1038/s41598-017-08977-w
work_keys_str_mv AT mahlmanmari genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT karjalainenminnak genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT huuskojohannam genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT anderssonsture genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT karimanneli genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT tammelaoutikt genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT sankilampiulla genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT lehtonenliisa genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT marttilariittah genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT basslerdirk genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT poetschristianf genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT lacazemasmonteilthierry genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT dananclaude genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT delacourtchristophe genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT palotieaarno genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT muglialouisj genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT lavoiepascalm genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT hadchouelalice genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT rametmika genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene
AT hallmanmikko genomewideassociationstudyofbronchopulmonarydysplasiaapotentialroleforvariantsnearthecrpgene