Cargando…
Lack of association between AKAP2 and the susceptibility of adolescent idiopathic scoliosis in the Chinese population
BACKGROUND: Adolescent idiopathic scoliosis (AIS) is a well characterized spinal deformity that affects millions of children world-wide. The role of genetic factor in the development of AIS has been of great interest, since obvious hereditary trend has been observed in AIS families. In a recent stud...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5571670/ https://www.ncbi.nlm.nih.gov/pubmed/28838314 http://dx.doi.org/10.1186/s12891-017-1731-x |
_version_ | 1783259389211181056 |
---|---|
author | Xu, Leilei Xia, Chao Zhu, Weiguo Feng, Zhenhua Qin, Xiaodong Sun, Weixiang Qiu, Yong Zhu, Zezhang |
author_facet | Xu, Leilei Xia, Chao Zhu, Weiguo Feng, Zhenhua Qin, Xiaodong Sun, Weixiang Qiu, Yong Zhu, Zezhang |
author_sort | Xu, Leilei |
collection | PubMed |
description | BACKGROUND: Adolescent idiopathic scoliosis (AIS) is a well characterized spinal deformity that affects millions of children world-wide. The role of genetic factor in the development of AIS has been of great interest, since obvious hereditary trend has been observed in AIS families. In a recent study of Chinese population, a novel mutation of AKAP2 was observed in a family with AIS, which was believed to play a role in the aetiopathogenesis of AIS. The purpose of this study was to investigate whether genetic variants of AKAP2 are associated with the susceptibility of AIS in Chinese population. METHODS: SNV c.2645A > C of AKAP2 was genotyped in 1254 AIS patients and 1232 normal controls using allelic-specific multiple ligase detection reactions. SNPs located within 5′ untranslated regions (UTR) and 3′ UTR of AKAP2 gene were selected using Haploview (v2.6). The GWAS database composed of 961 AIS patients and 1499 controls was referred to for the genotyping information. Relative mRNA expression of AKAP2 in peripheral blood was analyzed for 33 patients and 18 age-matched controls. Comparison between the cases and controls were performed using the Student’s t test. PLINK (v1.90) was used to calculate the association of each SNP with the disease by Cochran-Armitage trend test. RESULTS: All the patients and the controls presented a genotype of AA in c.2645A > C of AKAP2, and there was no case of mutation in any subject. A total of 116 SNPs covering AKAP2 were analyzed, and none of these SNPs was found to have significantly different allele frequency between the cases and the controls. The mRNA expression of AKAP2 in patients was comparable with that in the controls (1.9 ± 0.8 vs. 1.8 ± 0.7, p = 0.66). CONCLUSIONS: Our large-scale replication study of the variants in AKAP2 gene did not support its association with the susceptibility of AIS in the Chinese population. In future study, functional studies of the previously reported rare variant are warranted to clarify whether the variant can regulate the expression of AKAP2. The whole AKAP2 gene can be sequenced in larger AIS cohorts to identify potentially missing mutations. |
format | Online Article Text |
id | pubmed-5571670 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-55716702017-08-30 Lack of association between AKAP2 and the susceptibility of adolescent idiopathic scoliosis in the Chinese population Xu, Leilei Xia, Chao Zhu, Weiguo Feng, Zhenhua Qin, Xiaodong Sun, Weixiang Qiu, Yong Zhu, Zezhang BMC Musculoskelet Disord Research Article BACKGROUND: Adolescent idiopathic scoliosis (AIS) is a well characterized spinal deformity that affects millions of children world-wide. The role of genetic factor in the development of AIS has been of great interest, since obvious hereditary trend has been observed in AIS families. In a recent study of Chinese population, a novel mutation of AKAP2 was observed in a family with AIS, which was believed to play a role in the aetiopathogenesis of AIS. The purpose of this study was to investigate whether genetic variants of AKAP2 are associated with the susceptibility of AIS in Chinese population. METHODS: SNV c.2645A > C of AKAP2 was genotyped in 1254 AIS patients and 1232 normal controls using allelic-specific multiple ligase detection reactions. SNPs located within 5′ untranslated regions (UTR) and 3′ UTR of AKAP2 gene were selected using Haploview (v2.6). The GWAS database composed of 961 AIS patients and 1499 controls was referred to for the genotyping information. Relative mRNA expression of AKAP2 in peripheral blood was analyzed for 33 patients and 18 age-matched controls. Comparison between the cases and controls were performed using the Student’s t test. PLINK (v1.90) was used to calculate the association of each SNP with the disease by Cochran-Armitage trend test. RESULTS: All the patients and the controls presented a genotype of AA in c.2645A > C of AKAP2, and there was no case of mutation in any subject. A total of 116 SNPs covering AKAP2 were analyzed, and none of these SNPs was found to have significantly different allele frequency between the cases and the controls. The mRNA expression of AKAP2 in patients was comparable with that in the controls (1.9 ± 0.8 vs. 1.8 ± 0.7, p = 0.66). CONCLUSIONS: Our large-scale replication study of the variants in AKAP2 gene did not support its association with the susceptibility of AIS in the Chinese population. In future study, functional studies of the previously reported rare variant are warranted to clarify whether the variant can regulate the expression of AKAP2. The whole AKAP2 gene can be sequenced in larger AIS cohorts to identify potentially missing mutations. BioMed Central 2017-08-24 /pmc/articles/PMC5571670/ /pubmed/28838314 http://dx.doi.org/10.1186/s12891-017-1731-x Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Xu, Leilei Xia, Chao Zhu, Weiguo Feng, Zhenhua Qin, Xiaodong Sun, Weixiang Qiu, Yong Zhu, Zezhang Lack of association between AKAP2 and the susceptibility of adolescent idiopathic scoliosis in the Chinese population |
title | Lack of association between AKAP2 and the susceptibility of adolescent idiopathic scoliosis in the Chinese population |
title_full | Lack of association between AKAP2 and the susceptibility of adolescent idiopathic scoliosis in the Chinese population |
title_fullStr | Lack of association between AKAP2 and the susceptibility of adolescent idiopathic scoliosis in the Chinese population |
title_full_unstemmed | Lack of association between AKAP2 and the susceptibility of adolescent idiopathic scoliosis in the Chinese population |
title_short | Lack of association between AKAP2 and the susceptibility of adolescent idiopathic scoliosis in the Chinese population |
title_sort | lack of association between akap2 and the susceptibility of adolescent idiopathic scoliosis in the chinese population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5571670/ https://www.ncbi.nlm.nih.gov/pubmed/28838314 http://dx.doi.org/10.1186/s12891-017-1731-x |
work_keys_str_mv | AT xuleilei lackofassociationbetweenakap2andthesusceptibilityofadolescentidiopathicscoliosisinthechinesepopulation AT xiachao lackofassociationbetweenakap2andthesusceptibilityofadolescentidiopathicscoliosisinthechinesepopulation AT zhuweiguo lackofassociationbetweenakap2andthesusceptibilityofadolescentidiopathicscoliosisinthechinesepopulation AT fengzhenhua lackofassociationbetweenakap2andthesusceptibilityofadolescentidiopathicscoliosisinthechinesepopulation AT qinxiaodong lackofassociationbetweenakap2andthesusceptibilityofadolescentidiopathicscoliosisinthechinesepopulation AT sunweixiang lackofassociationbetweenakap2andthesusceptibilityofadolescentidiopathicscoliosisinthechinesepopulation AT qiuyong lackofassociationbetweenakap2andthesusceptibilityofadolescentidiopathicscoliosisinthechinesepopulation AT zhuzezhang lackofassociationbetweenakap2andthesusceptibilityofadolescentidiopathicscoliosisinthechinesepopulation |