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Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14

Wound healing involves an orchestrated response that engages multiple processes, such as hemostasis, cellular migration, extracellular matrix synthesis, and in particular, inflammation. Using a murine model of cutaneous wound repair, the transcriptome was mapped from 12 h to 8 days post-injury, and...

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Autores principales: St. Laurent, Georges, Seilheimer, Bernd, Tackett, Michael, Zhou, Jianhua, Shtokalo, Dmitry, Vyatkin, Yuri, Ri, Maxim, Toma, Ian, Jones, Dan, McCaffrey, Timothy A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5572416/
https://www.ncbi.nlm.nih.gov/pubmed/28879183
http://dx.doi.org/10.3389/fmolb.2017.00057
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author St. Laurent, Georges
Seilheimer, Bernd
Tackett, Michael
Zhou, Jianhua
Shtokalo, Dmitry
Vyatkin, Yuri
Ri, Maxim
Toma, Ian
Jones, Dan
McCaffrey, Timothy A.
author_facet St. Laurent, Georges
Seilheimer, Bernd
Tackett, Michael
Zhou, Jianhua
Shtokalo, Dmitry
Vyatkin, Yuri
Ri, Maxim
Toma, Ian
Jones, Dan
McCaffrey, Timothy A.
author_sort St. Laurent, Georges
collection PubMed
description Wound healing involves an orchestrated response that engages multiple processes, such as hemostasis, cellular migration, extracellular matrix synthesis, and in particular, inflammation. Using a murine model of cutaneous wound repair, the transcriptome was mapped from 12 h to 8 days post-injury, and in response to a multicomponent, multi-target natural product, Tr14. Using single-molecule RNA sequencing (RNA-seq), there were clear temporal changes in known transcripts related to wound healing pathways, and additional novel transcripts of both coding and non-coding genes. Tr14 treatment modulated >100 transcripts related to key wound repair pathways, such as response to wounding, wound contraction, and cytokine response. The results provide the most precise and comprehensive characterization to date of the transcriptome's response to skin damage, repair, and multicomponent natural product therapy. By understanding the wound repair process, and the effects of natural products, it should be possible to intervene more effectively in diseases involving aberrant repair.
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spelling pubmed-55724162017-09-06 Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14 St. Laurent, Georges Seilheimer, Bernd Tackett, Michael Zhou, Jianhua Shtokalo, Dmitry Vyatkin, Yuri Ri, Maxim Toma, Ian Jones, Dan McCaffrey, Timothy A. Front Mol Biosci Molecular Biosciences Wound healing involves an orchestrated response that engages multiple processes, such as hemostasis, cellular migration, extracellular matrix synthesis, and in particular, inflammation. Using a murine model of cutaneous wound repair, the transcriptome was mapped from 12 h to 8 days post-injury, and in response to a multicomponent, multi-target natural product, Tr14. Using single-molecule RNA sequencing (RNA-seq), there were clear temporal changes in known transcripts related to wound healing pathways, and additional novel transcripts of both coding and non-coding genes. Tr14 treatment modulated >100 transcripts related to key wound repair pathways, such as response to wounding, wound contraction, and cytokine response. The results provide the most precise and comprehensive characterization to date of the transcriptome's response to skin damage, repair, and multicomponent natural product therapy. By understanding the wound repair process, and the effects of natural products, it should be possible to intervene more effectively in diseases involving aberrant repair. Frontiers Media S.A. 2017-08-17 /pmc/articles/PMC5572416/ /pubmed/28879183 http://dx.doi.org/10.3389/fmolb.2017.00057 Text en Copyright © 2017 St. Laurent, Seilheimer, Tackett, Zhou, Shtokalo, Vyatkin, Ri, Toma, Jones and McCaffrey. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
St. Laurent, Georges
Seilheimer, Bernd
Tackett, Michael
Zhou, Jianhua
Shtokalo, Dmitry
Vyatkin, Yuri
Ri, Maxim
Toma, Ian
Jones, Dan
McCaffrey, Timothy A.
Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14
title Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14
title_full Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14
title_fullStr Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14
title_full_unstemmed Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14
title_short Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14
title_sort deep sequencing transcriptome analysis of murine wound healing: effects of a multicomponent, multitarget natural product therapy-tr14
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5572416/
https://www.ncbi.nlm.nih.gov/pubmed/28879183
http://dx.doi.org/10.3389/fmolb.2017.00057
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