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Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization

The Epic Platform was developed for the unbiased detection and molecular characterization of circulating tumour cells (CTCs). Here, we report assay performance data, including accuracy, linearity, specificity and intra/inter-assay precision of CTC enumeration in healthy donor (HD) blood samples spik...

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Autores principales: Werner, Shannon L., Graf, Ryon P., Landers, Mark, Valenta, David T., Schroeder, Matthew, Greene, Stephanie B., Bales, Natalee, Dittamore, Ryan, Marrinucci, Dena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5572988/
https://www.ncbi.nlm.nih.gov/pubmed/28936239
http://dx.doi.org/10.5772/60725
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author Werner, Shannon L.
Graf, Ryon P.
Landers, Mark
Valenta, David T.
Schroeder, Matthew
Greene, Stephanie B.
Bales, Natalee
Dittamore, Ryan
Marrinucci, Dena
author_facet Werner, Shannon L.
Graf, Ryon P.
Landers, Mark
Valenta, David T.
Schroeder, Matthew
Greene, Stephanie B.
Bales, Natalee
Dittamore, Ryan
Marrinucci, Dena
author_sort Werner, Shannon L.
collection PubMed
description The Epic Platform was developed for the unbiased detection and molecular characterization of circulating tumour cells (CTCs). Here, we report assay performance data, including accuracy, linearity, specificity and intra/inter-assay precision of CTC enumeration in healthy donor (HD) blood samples spiked with varying concentrations of cancer cell line controls (CLCs). Additionally, we demonstrate clinical feasibility for CTC detection in a small cohort of metastatic castrate-resistant prostate cancer (mCRPC) patients. The Epic Platform demonstrated accuracy, linearity and sensitivity for the enumeration of all CLC concentrations tested. Furthermore, we established the precision between multiple operators and slide staining batches and assay specificity showing zero CTCs detected in 18 healthy donor samples. In a clinical feasibility study, at least one traditional CTC/mL (CK+, CD45-, and intact nuclei) was detected in 89 % of 44 mCRPC samples, whereas 100 % of samples had CTCs enumerated if additional CTC subpopulations (CK-/CD45- and CK+ apoptotic CTCs) were included in the analysis. In addition to presenting Epic Platform's performance with respect to CTC enumeration, we provide examples of its integrated downstream capabilities, including protein biomarker expression and downstream genomic analyses at single cell resolution.
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spelling pubmed-55729882017-09-21 Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization Werner, Shannon L. Graf, Ryon P. Landers, Mark Valenta, David T. Schroeder, Matthew Greene, Stephanie B. Bales, Natalee Dittamore, Ryan Marrinucci, Dena J Circ Biomark Invited Feature Article The Epic Platform was developed for the unbiased detection and molecular characterization of circulating tumour cells (CTCs). Here, we report assay performance data, including accuracy, linearity, specificity and intra/inter-assay precision of CTC enumeration in healthy donor (HD) blood samples spiked with varying concentrations of cancer cell line controls (CLCs). Additionally, we demonstrate clinical feasibility for CTC detection in a small cohort of metastatic castrate-resistant prostate cancer (mCRPC) patients. The Epic Platform demonstrated accuracy, linearity and sensitivity for the enumeration of all CLC concentrations tested. Furthermore, we established the precision between multiple operators and slide staining batches and assay specificity showing zero CTCs detected in 18 healthy donor samples. In a clinical feasibility study, at least one traditional CTC/mL (CK+, CD45-, and intact nuclei) was detected in 89 % of 44 mCRPC samples, whereas 100 % of samples had CTCs enumerated if additional CTC subpopulations (CK-/CD45- and CK+ apoptotic CTCs) were included in the analysis. In addition to presenting Epic Platform's performance with respect to CTC enumeration, we provide examples of its integrated downstream capabilities, including protein biomarker expression and downstream genomic analyses at single cell resolution. SAGE Publications 2015-05-05 /pmc/articles/PMC5572988/ /pubmed/28936239 http://dx.doi.org/10.5772/60725 Text en © 2015 The Author(s). Licensee InTech. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Invited Feature Article
Werner, Shannon L.
Graf, Ryon P.
Landers, Mark
Valenta, David T.
Schroeder, Matthew
Greene, Stephanie B.
Bales, Natalee
Dittamore, Ryan
Marrinucci, Dena
Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization
title Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization
title_full Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization
title_fullStr Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization
title_full_unstemmed Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization
title_short Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization
title_sort analytical validation and capabilities of the epic ctc platform: enrichment-free circulating tumour cell detection and characterization
topic Invited Feature Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5572988/
https://www.ncbi.nlm.nih.gov/pubmed/28936239
http://dx.doi.org/10.5772/60725
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