The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types

The latest project from the FANTOM consortium, an international collaborative effort initiated by RIKEN, generated atlases of transcriptomes, in particular promoters, transcribed enhancers, and long-noncoding RNAs, across a diverse set of mammalian cell types. Here, we introduce the FANTOM5 collecti...

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Autores principales: Kawaji, Hideya, Kasukawa, Takeya, Forrest, Alistair, Carninci, Piero, Hayashizaki, Yoshihide
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Comment
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5574373/
https://www.ncbi.nlm.nih.gov/pubmed/28850107
http://dx.doi.org/10.1038/sdata.2017.113
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author Kawaji, Hideya
Kasukawa, Takeya
Forrest, Alistair
Carninci, Piero
Hayashizaki, Yoshihide
author_facet Kawaji, Hideya
Kasukawa, Takeya
Forrest, Alistair
Carninci, Piero
Hayashizaki, Yoshihide
author_sort Kawaji, Hideya
collection PubMed
description The latest project from the FANTOM consortium, an international collaborative effort initiated by RIKEN, generated atlases of transcriptomes, in particular promoters, transcribed enhancers, and long-noncoding RNAs, across a diverse set of mammalian cell types. Here, we introduce the FANTOM5 collection, bringing together data descriptors, articles and analyses of FANTOM5 data published across the Nature Research journals. Associated data are openly available for reuse by all.
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spelling pubmed-55743732017-09-05 The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types Kawaji, Hideya Kasukawa, Takeya Forrest, Alistair Carninci, Piero Hayashizaki, Yoshihide Sci Data Comment The latest project from the FANTOM consortium, an international collaborative effort initiated by RIKEN, generated atlases of transcriptomes, in particular promoters, transcribed enhancers, and long-noncoding RNAs, across a diverse set of mammalian cell types. Here, we introduce the FANTOM5 collection, bringing together data descriptors, articles and analyses of FANTOM5 data published across the Nature Research journals. Associated data are openly available for reuse by all. Nature Publishing Group 2017-08-29 /pmc/articles/PMC5574373/ /pubmed/28850107 http://dx.doi.org/10.1038/sdata.2017.113 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Comment
Kawaji, Hideya
Kasukawa, Takeya
Forrest, Alistair
Carninci, Piero
Hayashizaki, Yoshihide
The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types
title The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types
title_full The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types
title_fullStr The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types
title_full_unstemmed The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types
title_short The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types
title_sort fantom5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types
topic Comment
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5574373/
https://www.ncbi.nlm.nih.gov/pubmed/28850107
http://dx.doi.org/10.1038/sdata.2017.113
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