Cargando…

The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4

Soil contamination by PAH and heavy metals is a growing problem. Here, we showed that a new isolate, Pseudomonas brassicacearum strain LZ-4, can simultaneously degrade 98% of 6 mM naphthalene and reduce 92.4% of 500 μM hexavalent chromium [Cr (VI)] within 68 h. A draft genome sequence of strain LZ-4...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Haiying, Tao, Xuanyu, Jiang, Yiming, Khan, Aman, Wu, Qi, Yu, Xuan, Wu, Dan, Chen, Yong, Ling, Zhenmin, Liu, Pu, Li, Xiangkai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5575117/
https://www.ncbi.nlm.nih.gov/pubmed/28852154
http://dx.doi.org/10.1038/s41598-017-10469-w
_version_ 1783259976620310528
author Huang, Haiying
Tao, Xuanyu
Jiang, Yiming
Khan, Aman
Wu, Qi
Yu, Xuan
Wu, Dan
Chen, Yong
Ling, Zhenmin
Liu, Pu
Li, Xiangkai
author_facet Huang, Haiying
Tao, Xuanyu
Jiang, Yiming
Khan, Aman
Wu, Qi
Yu, Xuan
Wu, Dan
Chen, Yong
Ling, Zhenmin
Liu, Pu
Li, Xiangkai
author_sort Huang, Haiying
collection PubMed
description Soil contamination by PAH and heavy metals is a growing problem. Here, we showed that a new isolate, Pseudomonas brassicacearum strain LZ-4, can simultaneously degrade 98% of 6 mM naphthalene and reduce 92.4% of 500 μM hexavalent chromium [Cr (VI)] within 68 h. A draft genome sequence of strain LZ-4 (6,219,082 bp) revealed all the genes in the naphthalene catabolic pathway and some known Cr (VI) reductases. Interestingly, genes encoding naphthalene pathway components were upregulated in the presence of Cr (VI), and Cr (VI) reduction was elevated in the presence of naphthalene. We cloned and expressed these naphthalene catabolic genes and tested for Cr (VI) reduction, and found that NahG reduced 79% of 100 μM Cr (VI) in 5 minutes. Additionally, an nahG deletion mutant lost 52% of its Cr (VI) reduction ability compared to that of the wild-type strain. As nahG encodes a salicylate hydroxylase with flavin adenine dinucleotide (FAD) as a cofactor for electron transfer, Cr (VI) could obtain electrons from NADH through NahG-associated FAD. To the best of our knowledge, this is the first report of a protein involved in a PAH-degradation pathway that can reduce heavy metals, which provides new insights into heavy metal-PAH contamination remediation.
format Online
Article
Text
id pubmed-5575117
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-55751172017-09-01 The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4 Huang, Haiying Tao, Xuanyu Jiang, Yiming Khan, Aman Wu, Qi Yu, Xuan Wu, Dan Chen, Yong Ling, Zhenmin Liu, Pu Li, Xiangkai Sci Rep Article Soil contamination by PAH and heavy metals is a growing problem. Here, we showed that a new isolate, Pseudomonas brassicacearum strain LZ-4, can simultaneously degrade 98% of 6 mM naphthalene and reduce 92.4% of 500 μM hexavalent chromium [Cr (VI)] within 68 h. A draft genome sequence of strain LZ-4 (6,219,082 bp) revealed all the genes in the naphthalene catabolic pathway and some known Cr (VI) reductases. Interestingly, genes encoding naphthalene pathway components were upregulated in the presence of Cr (VI), and Cr (VI) reduction was elevated in the presence of naphthalene. We cloned and expressed these naphthalene catabolic genes and tested for Cr (VI) reduction, and found that NahG reduced 79% of 100 μM Cr (VI) in 5 minutes. Additionally, an nahG deletion mutant lost 52% of its Cr (VI) reduction ability compared to that of the wild-type strain. As nahG encodes a salicylate hydroxylase with flavin adenine dinucleotide (FAD) as a cofactor for electron transfer, Cr (VI) could obtain electrons from NADH through NahG-associated FAD. To the best of our knowledge, this is the first report of a protein involved in a PAH-degradation pathway that can reduce heavy metals, which provides new insights into heavy metal-PAH contamination remediation. Nature Publishing Group UK 2017-08-29 /pmc/articles/PMC5575117/ /pubmed/28852154 http://dx.doi.org/10.1038/s41598-017-10469-w Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Huang, Haiying
Tao, Xuanyu
Jiang, Yiming
Khan, Aman
Wu, Qi
Yu, Xuan
Wu, Dan
Chen, Yong
Ling, Zhenmin
Liu, Pu
Li, Xiangkai
The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4
title The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4
title_full The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4
title_fullStr The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4
title_full_unstemmed The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4
title_short The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4
title_sort naphthalene catabolic protein nahg plays a key role in hexavalent chromium reduction in pseudomonas brassicacearum lz-4
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5575117/
https://www.ncbi.nlm.nih.gov/pubmed/28852154
http://dx.doi.org/10.1038/s41598-017-10469-w
work_keys_str_mv AT huanghaiying thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT taoxuanyu thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT jiangyiming thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT khanaman thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT wuqi thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT yuxuan thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT wudan thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT chenyong thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT lingzhenmin thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT liupu thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT lixiangkai thenaphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT huanghaiying naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT taoxuanyu naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT jiangyiming naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT khanaman naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT wuqi naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT yuxuan naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT wudan naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT chenyong naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT lingzhenmin naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT liupu naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4
AT lixiangkai naphthalenecatabolicproteinnahgplaysakeyroleinhexavalentchromiumreductioninpseudomonasbrassicacearumlz4