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Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers
The woodland strawberry, Fragaria vesca, holds great promise as a model organism. It not only represents the important Rosaceae family that includes economically important species such as apples, pears, peaches and roses, but it also complements the well-known model organism Arabidopsis thaliana in...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5576660/ https://www.ncbi.nlm.nih.gov/pubmed/28854285 http://dx.doi.org/10.1371/journal.pone.0183384 |
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author | Hilmarsson, Hrannar Smári Hytönen, Timo Isobe, Sachiko Göransson, Magnus Toivainen, Tuomas Hallsson, Jón Hallsteinn |
author_facet | Hilmarsson, Hrannar Smári Hytönen, Timo Isobe, Sachiko Göransson, Magnus Toivainen, Tuomas Hallsson, Jón Hallsteinn |
author_sort | Hilmarsson, Hrannar Smári |
collection | PubMed |
description | The woodland strawberry, Fragaria vesca, holds great promise as a model organism. It not only represents the important Rosaceae family that includes economically important species such as apples, pears, peaches and roses, but it also complements the well-known model organism Arabidopsis thaliana in key areas such as perennial life cycle and the development of fleshy fruit. Analysis of wild populations of A. thaliana has shed light on several important developmental pathways controlling, for example, flowering time and plant growth, suggesting that a similar approach using F. vesca might add to our understanding on the development of rosaceous species and perennials in general. As a first step, 298 F. vesca plants were analyzed using microsatellite markers with the primary aim of analyzing population structure and distribution of genetic diversity. Of the 68 markers tested, 56 were polymorphic, with an average of 4.46 alleles per locus. Our analysis partly confirms previous classification of F. vesca subspecies in North America and suggests two groups within the subsp. bracteata. In addition, F. vesca subsp. vesca forms a single global population with evidence that the Icelandic group is a separate cluster from the main Eurasian population. |
format | Online Article Text |
id | pubmed-5576660 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-55766602017-09-15 Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers Hilmarsson, Hrannar Smári Hytönen, Timo Isobe, Sachiko Göransson, Magnus Toivainen, Tuomas Hallsson, Jón Hallsteinn PLoS One Research Article The woodland strawberry, Fragaria vesca, holds great promise as a model organism. It not only represents the important Rosaceae family that includes economically important species such as apples, pears, peaches and roses, but it also complements the well-known model organism Arabidopsis thaliana in key areas such as perennial life cycle and the development of fleshy fruit. Analysis of wild populations of A. thaliana has shed light on several important developmental pathways controlling, for example, flowering time and plant growth, suggesting that a similar approach using F. vesca might add to our understanding on the development of rosaceous species and perennials in general. As a first step, 298 F. vesca plants were analyzed using microsatellite markers with the primary aim of analyzing population structure and distribution of genetic diversity. Of the 68 markers tested, 56 were polymorphic, with an average of 4.46 alleles per locus. Our analysis partly confirms previous classification of F. vesca subspecies in North America and suggests two groups within the subsp. bracteata. In addition, F. vesca subsp. vesca forms a single global population with evidence that the Icelandic group is a separate cluster from the main Eurasian population. Public Library of Science 2017-08-30 /pmc/articles/PMC5576660/ /pubmed/28854285 http://dx.doi.org/10.1371/journal.pone.0183384 Text en © 2017 Hilmarsson et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Hilmarsson, Hrannar Smári Hytönen, Timo Isobe, Sachiko Göransson, Magnus Toivainen, Tuomas Hallsson, Jón Hallsteinn Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers |
title | Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers |
title_full | Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers |
title_fullStr | Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers |
title_full_unstemmed | Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers |
title_short | Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers |
title_sort | population genetic analysis of a global collection of fragaria vesca using microsatellite markers |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5576660/ https://www.ncbi.nlm.nih.gov/pubmed/28854285 http://dx.doi.org/10.1371/journal.pone.0183384 |
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