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Whole blood microRNA markers are associated with acute respiratory distress syndrome
BACKGROUND: MicroRNAs (miRNAs) can play important roles in inflammation and infection, which are common manifestations of acute respiratory distress syndrome (ARDS). We assessed if whole blood miRNAs were potential diagnostic biomarkers for human ARDS. METHODS: This nested case-control study (N = 53...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5577350/ https://www.ncbi.nlm.nih.gov/pubmed/28856588 http://dx.doi.org/10.1186/s40635-017-0155-0 |
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author | Zhu, Zhaozhong Liang, Liming Zhang, Ruyang Wei, Yongyue Su, Li Tejera, Paula Guo, Yichen Wang, Zhaoxi Lu, Quan Baccarelli, Andrea A. Zhu, Xi Bajwa, Ednan K. Taylor Thompson, B. Shi, Guo-Ping Christiani, David C. |
author_facet | Zhu, Zhaozhong Liang, Liming Zhang, Ruyang Wei, Yongyue Su, Li Tejera, Paula Guo, Yichen Wang, Zhaoxi Lu, Quan Baccarelli, Andrea A. Zhu, Xi Bajwa, Ednan K. Taylor Thompson, B. Shi, Guo-Ping Christiani, David C. |
author_sort | Zhu, Zhaozhong |
collection | PubMed |
description | BACKGROUND: MicroRNAs (miRNAs) can play important roles in inflammation and infection, which are common manifestations of acute respiratory distress syndrome (ARDS). We assessed if whole blood miRNAs were potential diagnostic biomarkers for human ARDS. METHODS: This nested case-control study (N = 530) examined a cohort of ARDS patients and critically ill at-risk controls. Whole blood miRNA profiles and logistic regression analyses identified miRNAs correlated with ARDS. Stratification analysis also assessed selected miRNA markers for their role in sepsis and pneumonia associated with ARDS. Receiver operating characteristic (ROC) analysis evaluated miRNA diagnostic performance, along with Lung Injury Prediction Score (LIPS). RESULTS: Statistical analyses were performed on 294 miRNAs, selected from 754 miRNAs after quality control screening. Logistic regression identified 22 miRNAs from a 156-patient discovery cohort as potential risk or protective markers of ARDS. Three miRNAs—miR-181a, miR-92a, and miR-424—from the discovery cohort remained significantly associated with ARDS in a 373-patient independent validation cohort (FDR q < 0.05) and meta-analysis (p < 0.001). ROC analyses demonstrated a LIPS baseline area-under-the-curve (AUC) value of ARDS of 0.708 (95% CI 0.651–0.766). Addition of miR-181a, miR-92a, and miR-424 to LIPS increased baseline AUC to 0.723 (95% CI 0.667–0.778), with a relative integrated discrimination improvement of 2.40 (p = 0.005) and a category-free net reclassification index of 27.21% (p = 0.01). CONCLUSIONS: miR-181a and miR-92a are risk biomarkers for ARDS, whereas miR-424 is a protective biomarker. Addition of these miRNAs to LIPS can improve the risk estimate for ARDS. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40635-017-0155-0) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5577350 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-55773502017-09-18 Whole blood microRNA markers are associated with acute respiratory distress syndrome Zhu, Zhaozhong Liang, Liming Zhang, Ruyang Wei, Yongyue Su, Li Tejera, Paula Guo, Yichen Wang, Zhaoxi Lu, Quan Baccarelli, Andrea A. Zhu, Xi Bajwa, Ednan K. Taylor Thompson, B. Shi, Guo-Ping Christiani, David C. Intensive Care Med Exp Research BACKGROUND: MicroRNAs (miRNAs) can play important roles in inflammation and infection, which are common manifestations of acute respiratory distress syndrome (ARDS). We assessed if whole blood miRNAs were potential diagnostic biomarkers for human ARDS. METHODS: This nested case-control study (N = 530) examined a cohort of ARDS patients and critically ill at-risk controls. Whole blood miRNA profiles and logistic regression analyses identified miRNAs correlated with ARDS. Stratification analysis also assessed selected miRNA markers for their role in sepsis and pneumonia associated with ARDS. Receiver operating characteristic (ROC) analysis evaluated miRNA diagnostic performance, along with Lung Injury Prediction Score (LIPS). RESULTS: Statistical analyses were performed on 294 miRNAs, selected from 754 miRNAs after quality control screening. Logistic regression identified 22 miRNAs from a 156-patient discovery cohort as potential risk or protective markers of ARDS. Three miRNAs—miR-181a, miR-92a, and miR-424—from the discovery cohort remained significantly associated with ARDS in a 373-patient independent validation cohort (FDR q < 0.05) and meta-analysis (p < 0.001). ROC analyses demonstrated a LIPS baseline area-under-the-curve (AUC) value of ARDS of 0.708 (95% CI 0.651–0.766). Addition of miR-181a, miR-92a, and miR-424 to LIPS increased baseline AUC to 0.723 (95% CI 0.667–0.778), with a relative integrated discrimination improvement of 2.40 (p = 0.005) and a category-free net reclassification index of 27.21% (p = 0.01). CONCLUSIONS: miR-181a and miR-92a are risk biomarkers for ARDS, whereas miR-424 is a protective biomarker. Addition of these miRNAs to LIPS can improve the risk estimate for ARDS. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40635-017-0155-0) contains supplementary material, which is available to authorized users. Springer International Publishing 2017-08-30 /pmc/articles/PMC5577350/ /pubmed/28856588 http://dx.doi.org/10.1186/s40635-017-0155-0 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Research Zhu, Zhaozhong Liang, Liming Zhang, Ruyang Wei, Yongyue Su, Li Tejera, Paula Guo, Yichen Wang, Zhaoxi Lu, Quan Baccarelli, Andrea A. Zhu, Xi Bajwa, Ednan K. Taylor Thompson, B. Shi, Guo-Ping Christiani, David C. Whole blood microRNA markers are associated with acute respiratory distress syndrome |
title | Whole blood microRNA markers are associated with acute respiratory distress syndrome |
title_full | Whole blood microRNA markers are associated with acute respiratory distress syndrome |
title_fullStr | Whole blood microRNA markers are associated with acute respiratory distress syndrome |
title_full_unstemmed | Whole blood microRNA markers are associated with acute respiratory distress syndrome |
title_short | Whole blood microRNA markers are associated with acute respiratory distress syndrome |
title_sort | whole blood microrna markers are associated with acute respiratory distress syndrome |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5577350/ https://www.ncbi.nlm.nih.gov/pubmed/28856588 http://dx.doi.org/10.1186/s40635-017-0155-0 |
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