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Genetic association study of common variants in TGFB1 and IL-6 with developmental dysplasia of the hip in Han Chinese population
Developmental dysplasia of the hip (DDH) is a congenital or developmental deformation or misalignment of the hip joint that is affected by environmental and genetic factors. Recently, polymorphisms in both TGFB1 and IL-6 have been identified as being significantly associated with hip osteoarthritis...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5579245/ https://www.ncbi.nlm.nih.gov/pubmed/28860542 http://dx.doi.org/10.1038/s41598-017-11185-1 |
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author | Ma, Wenlong Zha, Zhuqing Chen, Ke Chen, Honggan Wu, Yixin Ma, Jianbing Zeng, Sixiang Zhi, Liqiang Yao, Shuxin |
author_facet | Ma, Wenlong Zha, Zhuqing Chen, Ke Chen, Honggan Wu, Yixin Ma, Jianbing Zeng, Sixiang Zhi, Liqiang Yao, Shuxin |
author_sort | Ma, Wenlong |
collection | PubMed |
description | Developmental dysplasia of the hip (DDH) is a congenital or developmental deformation or misalignment of the hip joint that is affected by environmental and genetic factors. Recently, polymorphisms in both TGFB1 and IL-6 have been identified as being significantly associated with hip osteoarthritis in Caucasians. In this study, we conducted a case-control study involving 4,206 Han Chinese individuals to investigate the effects of TGFB1 and IL-6 on the disease status and severity of DDH. A total of 32 single-nucleotide polymorphisms (SNPs) were selected to ensure coverage of the two genetic loci. We found SNP rs1800470 in TGFB1 (OR = 1.255, P = 0.0004) and rs1800796 (OR = 0.84, P = 0.0228) in IL-6 to be significantly associated with DDH in this cohort. Further haplotype-based analysis replicated this significant result. Another SNP in IL-6, rs1800796, showed a marginally significant association with DDH. As a non-synonymous SNP, rs1800470 alters the amino acid sequence of the polypeptide encoded by TGFB1; however, bioinformatics analyses revealed that this SNP has limited functional significance. No significant results were obtained in an association study focusing on the severity of DDH and epistasis analysis. Our findings support an important role for TGFB1 in the risk of DDH. Further research is needed to validate the weak association between rs1800796 in IL-6 and DDH. |
format | Online Article Text |
id | pubmed-5579245 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-55792452017-09-06 Genetic association study of common variants in TGFB1 and IL-6 with developmental dysplasia of the hip in Han Chinese population Ma, Wenlong Zha, Zhuqing Chen, Ke Chen, Honggan Wu, Yixin Ma, Jianbing Zeng, Sixiang Zhi, Liqiang Yao, Shuxin Sci Rep Article Developmental dysplasia of the hip (DDH) is a congenital or developmental deformation or misalignment of the hip joint that is affected by environmental and genetic factors. Recently, polymorphisms in both TGFB1 and IL-6 have been identified as being significantly associated with hip osteoarthritis in Caucasians. In this study, we conducted a case-control study involving 4,206 Han Chinese individuals to investigate the effects of TGFB1 and IL-6 on the disease status and severity of DDH. A total of 32 single-nucleotide polymorphisms (SNPs) were selected to ensure coverage of the two genetic loci. We found SNP rs1800470 in TGFB1 (OR = 1.255, P = 0.0004) and rs1800796 (OR = 0.84, P = 0.0228) in IL-6 to be significantly associated with DDH in this cohort. Further haplotype-based analysis replicated this significant result. Another SNP in IL-6, rs1800796, showed a marginally significant association with DDH. As a non-synonymous SNP, rs1800470 alters the amino acid sequence of the polypeptide encoded by TGFB1; however, bioinformatics analyses revealed that this SNP has limited functional significance. No significant results were obtained in an association study focusing on the severity of DDH and epistasis analysis. Our findings support an important role for TGFB1 in the risk of DDH. Further research is needed to validate the weak association between rs1800796 in IL-6 and DDH. Nature Publishing Group UK 2017-08-31 /pmc/articles/PMC5579245/ /pubmed/28860542 http://dx.doi.org/10.1038/s41598-017-11185-1 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Ma, Wenlong Zha, Zhuqing Chen, Ke Chen, Honggan Wu, Yixin Ma, Jianbing Zeng, Sixiang Zhi, Liqiang Yao, Shuxin Genetic association study of common variants in TGFB1 and IL-6 with developmental dysplasia of the hip in Han Chinese population |
title | Genetic association study of common variants in TGFB1 and IL-6 with developmental dysplasia of the hip in Han Chinese population |
title_full | Genetic association study of common variants in TGFB1 and IL-6 with developmental dysplasia of the hip in Han Chinese population |
title_fullStr | Genetic association study of common variants in TGFB1 and IL-6 with developmental dysplasia of the hip in Han Chinese population |
title_full_unstemmed | Genetic association study of common variants in TGFB1 and IL-6 with developmental dysplasia of the hip in Han Chinese population |
title_short | Genetic association study of common variants in TGFB1 and IL-6 with developmental dysplasia of the hip in Han Chinese population |
title_sort | genetic association study of common variants in tgfb1 and il-6 with developmental dysplasia of the hip in han chinese population |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5579245/ https://www.ncbi.nlm.nih.gov/pubmed/28860542 http://dx.doi.org/10.1038/s41598-017-11185-1 |
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