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Modelling variability in cardiac electrophysiology: a moment-matching approach

The variability observed in action potential (AP) cardiomyocyte measurements is the consequence of many different sources of randomness. Often ignored, this variability may be studied to gain insight into the cell ionic properties. In this paper, we focus on the study of ionic channel conductances a...

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Autores principales: Tixier, Eliott, Lombardi, Damiano, Rodriguez, Blanca, Gerbeau, Jean-Frédéric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5582121/
https://www.ncbi.nlm.nih.gov/pubmed/28835541
http://dx.doi.org/10.1098/rsif.2017.0238
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author Tixier, Eliott
Lombardi, Damiano
Rodriguez, Blanca
Gerbeau, Jean-Frédéric
author_facet Tixier, Eliott
Lombardi, Damiano
Rodriguez, Blanca
Gerbeau, Jean-Frédéric
author_sort Tixier, Eliott
collection PubMed
description The variability observed in action potential (AP) cardiomyocyte measurements is the consequence of many different sources of randomness. Often ignored, this variability may be studied to gain insight into the cell ionic properties. In this paper, we focus on the study of ionic channel conductances and describe a methodology to estimate their probability density function (PDF) from AP recordings. The method relies on the matching of observable statistical moments and on the maximum entropy principle. We present four case studies using synthetic and sets of experimental AP measurements from human and canine cardiomyocytes. In each case, the proposed methodology is applied to infer the PDF of key conductances from the exhibited variability. The estimated PDFs are discussed and, when possible, compared to the true distributions. We conclude that it is possible to extract relevant information from the variability in AP measurements and discuss the limitations and possible implications of the proposed approach.
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spelling pubmed-55821212018-07-13 Modelling variability in cardiac electrophysiology: a moment-matching approach Tixier, Eliott Lombardi, Damiano Rodriguez, Blanca Gerbeau, Jean-Frédéric J R Soc Interface Life Sciences–Mathematics interface The variability observed in action potential (AP) cardiomyocyte measurements is the consequence of many different sources of randomness. Often ignored, this variability may be studied to gain insight into the cell ionic properties. In this paper, we focus on the study of ionic channel conductances and describe a methodology to estimate their probability density function (PDF) from AP recordings. The method relies on the matching of observable statistical moments and on the maximum entropy principle. We present four case studies using synthetic and sets of experimental AP measurements from human and canine cardiomyocytes. In each case, the proposed methodology is applied to infer the PDF of key conductances from the exhibited variability. The estimated PDFs are discussed and, when possible, compared to the true distributions. We conclude that it is possible to extract relevant information from the variability in AP measurements and discuss the limitations and possible implications of the proposed approach. The Royal Society 2017-08 2017-08-23 /pmc/articles/PMC5582121/ /pubmed/28835541 http://dx.doi.org/10.1098/rsif.2017.0238 Text en © 2017 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Life Sciences–Mathematics interface
Tixier, Eliott
Lombardi, Damiano
Rodriguez, Blanca
Gerbeau, Jean-Frédéric
Modelling variability in cardiac electrophysiology: a moment-matching approach
title Modelling variability in cardiac electrophysiology: a moment-matching approach
title_full Modelling variability in cardiac electrophysiology: a moment-matching approach
title_fullStr Modelling variability in cardiac electrophysiology: a moment-matching approach
title_full_unstemmed Modelling variability in cardiac electrophysiology: a moment-matching approach
title_short Modelling variability in cardiac electrophysiology: a moment-matching approach
title_sort modelling variability in cardiac electrophysiology: a moment-matching approach
topic Life Sciences–Mathematics interface
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5582121/
https://www.ncbi.nlm.nih.gov/pubmed/28835541
http://dx.doi.org/10.1098/rsif.2017.0238
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