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Modelling variability in cardiac electrophysiology: a moment-matching approach
The variability observed in action potential (AP) cardiomyocyte measurements is the consequence of many different sources of randomness. Often ignored, this variability may be studied to gain insight into the cell ionic properties. In this paper, we focus on the study of ionic channel conductances a...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5582121/ https://www.ncbi.nlm.nih.gov/pubmed/28835541 http://dx.doi.org/10.1098/rsif.2017.0238 |
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author | Tixier, Eliott Lombardi, Damiano Rodriguez, Blanca Gerbeau, Jean-Frédéric |
author_facet | Tixier, Eliott Lombardi, Damiano Rodriguez, Blanca Gerbeau, Jean-Frédéric |
author_sort | Tixier, Eliott |
collection | PubMed |
description | The variability observed in action potential (AP) cardiomyocyte measurements is the consequence of many different sources of randomness. Often ignored, this variability may be studied to gain insight into the cell ionic properties. In this paper, we focus on the study of ionic channel conductances and describe a methodology to estimate their probability density function (PDF) from AP recordings. The method relies on the matching of observable statistical moments and on the maximum entropy principle. We present four case studies using synthetic and sets of experimental AP measurements from human and canine cardiomyocytes. In each case, the proposed methodology is applied to infer the PDF of key conductances from the exhibited variability. The estimated PDFs are discussed and, when possible, compared to the true distributions. We conclude that it is possible to extract relevant information from the variability in AP measurements and discuss the limitations and possible implications of the proposed approach. |
format | Online Article Text |
id | pubmed-5582121 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-55821212018-07-13 Modelling variability in cardiac electrophysiology: a moment-matching approach Tixier, Eliott Lombardi, Damiano Rodriguez, Blanca Gerbeau, Jean-Frédéric J R Soc Interface Life Sciences–Mathematics interface The variability observed in action potential (AP) cardiomyocyte measurements is the consequence of many different sources of randomness. Often ignored, this variability may be studied to gain insight into the cell ionic properties. In this paper, we focus on the study of ionic channel conductances and describe a methodology to estimate their probability density function (PDF) from AP recordings. The method relies on the matching of observable statistical moments and on the maximum entropy principle. We present four case studies using synthetic and sets of experimental AP measurements from human and canine cardiomyocytes. In each case, the proposed methodology is applied to infer the PDF of key conductances from the exhibited variability. The estimated PDFs are discussed and, when possible, compared to the true distributions. We conclude that it is possible to extract relevant information from the variability in AP measurements and discuss the limitations and possible implications of the proposed approach. The Royal Society 2017-08 2017-08-23 /pmc/articles/PMC5582121/ /pubmed/28835541 http://dx.doi.org/10.1098/rsif.2017.0238 Text en © 2017 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Life Sciences–Mathematics interface Tixier, Eliott Lombardi, Damiano Rodriguez, Blanca Gerbeau, Jean-Frédéric Modelling variability in cardiac electrophysiology: a moment-matching approach |
title | Modelling variability in cardiac electrophysiology: a moment-matching approach |
title_full | Modelling variability in cardiac electrophysiology: a moment-matching approach |
title_fullStr | Modelling variability in cardiac electrophysiology: a moment-matching approach |
title_full_unstemmed | Modelling variability in cardiac electrophysiology: a moment-matching approach |
title_short | Modelling variability in cardiac electrophysiology: a moment-matching approach |
title_sort | modelling variability in cardiac electrophysiology: a moment-matching approach |
topic | Life Sciences–Mathematics interface |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5582121/ https://www.ncbi.nlm.nih.gov/pubmed/28835541 http://dx.doi.org/10.1098/rsif.2017.0238 |
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