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Model selection for dynamical systems via sparse regression and information criteria
We develop an algorithm for model selection which allows for the consideration of a combinatorially large number of candidate models governing a dynamical system. The innovation circumvents a disadvantage of standard model selection which typically limits the number of candidate models considered du...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society Publishing
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5582175/ https://www.ncbi.nlm.nih.gov/pubmed/28878554 http://dx.doi.org/10.1098/rspa.2017.0009 |
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author | Mangan, N. M. Kutz, J. N. Brunton, S. L. Proctor, J. L. |
author_facet | Mangan, N. M. Kutz, J. N. Brunton, S. L. Proctor, J. L. |
author_sort | Mangan, N. M. |
collection | PubMed |
description | We develop an algorithm for model selection which allows for the consideration of a combinatorially large number of candidate models governing a dynamical system. The innovation circumvents a disadvantage of standard model selection which typically limits the number of candidate models considered due to the intractability of computing information criteria. Using a recently developed sparse identification of nonlinear dynamics algorithm, the sub-selection of candidate models near the Pareto frontier allows feasible computation of Akaike information criteria (AIC) or Bayes information criteria scores for the remaining candidate models. The information criteria hierarchically ranks the most informative models, enabling the automatic and principled selection of the model with the strongest support in relation to the time-series data. Specifically, we show that AIC scores place each candidate model in the strong support, weak support or no support category. The method correctly recovers several canonical dynamical systems, including a susceptible-exposed-infectious-recovered disease model, Burgers’ equation and the Lorenz equations, identifying the correct dynamical system as the only candidate model with strong support. |
format | Online Article Text |
id | pubmed-5582175 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | The Royal Society Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-55821752017-09-06 Model selection for dynamical systems via sparse regression and information criteria Mangan, N. M. Kutz, J. N. Brunton, S. L. Proctor, J. L. Proc Math Phys Eng Sci Research Articles We develop an algorithm for model selection which allows for the consideration of a combinatorially large number of candidate models governing a dynamical system. The innovation circumvents a disadvantage of standard model selection which typically limits the number of candidate models considered due to the intractability of computing information criteria. Using a recently developed sparse identification of nonlinear dynamics algorithm, the sub-selection of candidate models near the Pareto frontier allows feasible computation of Akaike information criteria (AIC) or Bayes information criteria scores for the remaining candidate models. The information criteria hierarchically ranks the most informative models, enabling the automatic and principled selection of the model with the strongest support in relation to the time-series data. Specifically, we show that AIC scores place each candidate model in the strong support, weak support or no support category. The method correctly recovers several canonical dynamical systems, including a susceptible-exposed-infectious-recovered disease model, Burgers’ equation and the Lorenz equations, identifying the correct dynamical system as the only candidate model with strong support. The Royal Society Publishing 2017-08 2017-08-30 /pmc/articles/PMC5582175/ /pubmed/28878554 http://dx.doi.org/10.1098/rspa.2017.0009 Text en © 2017 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Research Articles Mangan, N. M. Kutz, J. N. Brunton, S. L. Proctor, J. L. Model selection for dynamical systems via sparse regression and information criteria |
title | Model selection for dynamical systems via sparse regression and information criteria |
title_full | Model selection for dynamical systems via sparse regression and information criteria |
title_fullStr | Model selection for dynamical systems via sparse regression and information criteria |
title_full_unstemmed | Model selection for dynamical systems via sparse regression and information criteria |
title_short | Model selection for dynamical systems via sparse regression and information criteria |
title_sort | model selection for dynamical systems via sparse regression and information criteria |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5582175/ https://www.ncbi.nlm.nih.gov/pubmed/28878554 http://dx.doi.org/10.1098/rspa.2017.0009 |
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