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Isolation and characterization of microsatellite loci from Arthropodium cirratum (Asparagaceae)(1)

PREMISE OF THE STUDY: Microsatellite markers were developed for Arthropodium cirratum (Asparagaceae) to study population genetic structure and translocation of this species. These markers were tested for cross-amplification in two other Arthropodium species. METHODS AND RESULTS: Sixteen microsatelli...

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Autores principales: Bulgarella, Mariana, Biggs, Patrick J., de Lange, Peter J., Shepherd, Lara D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5584818/
https://www.ncbi.nlm.nih.gov/pubmed/28924514
http://dx.doi.org/10.3732/apps.1700041
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author Bulgarella, Mariana
Biggs, Patrick J.
de Lange, Peter J.
Shepherd, Lara D.
author_facet Bulgarella, Mariana
Biggs, Patrick J.
de Lange, Peter J.
Shepherd, Lara D.
author_sort Bulgarella, Mariana
collection PubMed
description PREMISE OF THE STUDY: Microsatellite markers were developed for Arthropodium cirratum (Asparagaceae) to study population genetic structure and translocation of this species. These markers were tested for cross-amplification in two other Arthropodium species. METHODS AND RESULTS: Sixteen microsatellite markers were developed from a genomic library and tested in three populations of A. cirratum. The loci exhibited one to five alleles per locus, with private alleles present in each of the populations. Cross-amplification tests in the two other New Zealand Arthropodium species revealed that many of the loci amplify and demonstrate polymorphism in A. bifurcatum. CONCLUSIONS: These markers will be useful for determining genetic structure in A. cirratum and for determining the origins of translocated populations of this species.
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spelling pubmed-55848182017-09-18 Isolation and characterization of microsatellite loci from Arthropodium cirratum (Asparagaceae)(1) Bulgarella, Mariana Biggs, Patrick J. de Lange, Peter J. Shepherd, Lara D. Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were developed for Arthropodium cirratum (Asparagaceae) to study population genetic structure and translocation of this species. These markers were tested for cross-amplification in two other Arthropodium species. METHODS AND RESULTS: Sixteen microsatellite markers were developed from a genomic library and tested in three populations of A. cirratum. The loci exhibited one to five alleles per locus, with private alleles present in each of the populations. Cross-amplification tests in the two other New Zealand Arthropodium species revealed that many of the loci amplify and demonstrate polymorphism in A. bifurcatum. CONCLUSIONS: These markers will be useful for determining genetic structure in A. cirratum and for determining the origins of translocated populations of this species. Botanical Society of America 2017-08-25 /pmc/articles/PMC5584818/ /pubmed/28924514 http://dx.doi.org/10.3732/apps.1700041 Text en © 2017 Bulgarella et al. Published by the Botanical Society of America https://creativecommons.org/licenses/by-nc-sa/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC-BY-NC-SA 4.0 (https://creativecommons.org/licenses/by-nc-sa/4.0/) ), which permits unrestricted noncommercial use and redistribution provided that the original author and source are credited and the new work is distributed under the same license as the original.
spellingShingle Primer Note
Bulgarella, Mariana
Biggs, Patrick J.
de Lange, Peter J.
Shepherd, Lara D.
Isolation and characterization of microsatellite loci from Arthropodium cirratum (Asparagaceae)(1)
title Isolation and characterization of microsatellite loci from Arthropodium cirratum (Asparagaceae)(1)
title_full Isolation and characterization of microsatellite loci from Arthropodium cirratum (Asparagaceae)(1)
title_fullStr Isolation and characterization of microsatellite loci from Arthropodium cirratum (Asparagaceae)(1)
title_full_unstemmed Isolation and characterization of microsatellite loci from Arthropodium cirratum (Asparagaceae)(1)
title_short Isolation and characterization of microsatellite loci from Arthropodium cirratum (Asparagaceae)(1)
title_sort isolation and characterization of microsatellite loci from arthropodium cirratum (asparagaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5584818/
https://www.ncbi.nlm.nih.gov/pubmed/28924514
http://dx.doi.org/10.3732/apps.1700041
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