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Plasma metabolomic study in Chinese patients with wet age-related macular degeneration
BACKGROUND: Age-related macular degeneration (AMD) is a leading disease associated with blindness. It has a high incidence and complex pathogenesis. We aimed to study the metabolomic characteristics in Chinese patients with wet AMD by analyzing the morning plasma of 20 healthy controls and 20 wet AM...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5585971/ https://www.ncbi.nlm.nih.gov/pubmed/28874192 http://dx.doi.org/10.1186/s12886-017-0555-7 |
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author | Luo, Dan Deng, Tingting Yuan, Wei Deng, Hui Jin, Ming |
author_facet | Luo, Dan Deng, Tingting Yuan, Wei Deng, Hui Jin, Ming |
author_sort | Luo, Dan |
collection | PubMed |
description | BACKGROUND: Age-related macular degeneration (AMD) is a leading disease associated with blindness. It has a high incidence and complex pathogenesis. We aimed to study the metabolomic characteristics in Chinese patients with wet AMD by analyzing the morning plasma of 20 healthy controls and 20 wet AMD patients for metabolic differences. METHODS: We used ultra-high-pressure liquid chromatography and quadrupole-time-of-flight mass spectrometry for this analysis. The relationship of these differences with AMD pathophysiology was also assessed. Remaining data were normalized using Pareto scaling, and then valid data were handled using multivariate data analysis with MetaboAnalysis software, including unsupervised principal component analysis and supervised partial least squares-discriminate analysis. The purpose of the present work was to identify significant metabolites for the analyses. Hierarchical clustering was conducted to identify metabolites that differed between the two groups. Significant metabolites were then identified using the established database, and features were mapped on the Kyoto Encyclopedia of Genes and Genomes. RESULTS: A total of 5443 ion peaks were detected, all of them attributable to the same 10 metabolites. These included some amino acids, isomaltose, hydrocortisone, and biliverdin. The heights of these peaks differed significantly between the two groups. The biosynthesis of amino acids pathways also differed profoundly between patients with wet AMD and controls. CONCLUSIONS: These findings suggested that metabolic profiles and and pathways differed between wet AMD and controls and may provide promising new targets for AMD-directed therapeutics and diagnostics. |
format | Online Article Text |
id | pubmed-5585971 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-55859712017-09-06 Plasma metabolomic study in Chinese patients with wet age-related macular degeneration Luo, Dan Deng, Tingting Yuan, Wei Deng, Hui Jin, Ming BMC Ophthalmol Research Article BACKGROUND: Age-related macular degeneration (AMD) is a leading disease associated with blindness. It has a high incidence and complex pathogenesis. We aimed to study the metabolomic characteristics in Chinese patients with wet AMD by analyzing the morning plasma of 20 healthy controls and 20 wet AMD patients for metabolic differences. METHODS: We used ultra-high-pressure liquid chromatography and quadrupole-time-of-flight mass spectrometry for this analysis. The relationship of these differences with AMD pathophysiology was also assessed. Remaining data were normalized using Pareto scaling, and then valid data were handled using multivariate data analysis with MetaboAnalysis software, including unsupervised principal component analysis and supervised partial least squares-discriminate analysis. The purpose of the present work was to identify significant metabolites for the analyses. Hierarchical clustering was conducted to identify metabolites that differed between the two groups. Significant metabolites were then identified using the established database, and features were mapped on the Kyoto Encyclopedia of Genes and Genomes. RESULTS: A total of 5443 ion peaks were detected, all of them attributable to the same 10 metabolites. These included some amino acids, isomaltose, hydrocortisone, and biliverdin. The heights of these peaks differed significantly between the two groups. The biosynthesis of amino acids pathways also differed profoundly between patients with wet AMD and controls. CONCLUSIONS: These findings suggested that metabolic profiles and and pathways differed between wet AMD and controls and may provide promising new targets for AMD-directed therapeutics and diagnostics. BioMed Central 2017-09-06 /pmc/articles/PMC5585971/ /pubmed/28874192 http://dx.doi.org/10.1186/s12886-017-0555-7 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Luo, Dan Deng, Tingting Yuan, Wei Deng, Hui Jin, Ming Plasma metabolomic study in Chinese patients with wet age-related macular degeneration |
title | Plasma metabolomic study in Chinese patients with wet age-related macular degeneration |
title_full | Plasma metabolomic study in Chinese patients with wet age-related macular degeneration |
title_fullStr | Plasma metabolomic study in Chinese patients with wet age-related macular degeneration |
title_full_unstemmed | Plasma metabolomic study in Chinese patients with wet age-related macular degeneration |
title_short | Plasma metabolomic study in Chinese patients with wet age-related macular degeneration |
title_sort | plasma metabolomic study in chinese patients with wet age-related macular degeneration |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5585971/ https://www.ncbi.nlm.nih.gov/pubmed/28874192 http://dx.doi.org/10.1186/s12886-017-0555-7 |
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