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A segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise
The fast and accurate segmentation of lung nodule image sequences is the basis of subsequent processing and diagnostic analyses. However, previous research investigating nodule segmentation algorithms cannot entirely segment cavitary nodules, and the segmentation of juxta-vascular nodules is inaccur...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5589176/ https://www.ncbi.nlm.nih.gov/pubmed/28880916 http://dx.doi.org/10.1371/journal.pone.0184290 |
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author | Zhang, Wei Zhang, Xiaolong Zhao, Juanjuan Qiang, Yan Tian, Qi Tang, Xiaoxian |
author_facet | Zhang, Wei Zhang, Xiaolong Zhao, Juanjuan Qiang, Yan Tian, Qi Tang, Xiaoxian |
author_sort | Zhang, Wei |
collection | PubMed |
description | The fast and accurate segmentation of lung nodule image sequences is the basis of subsequent processing and diagnostic analyses. However, previous research investigating nodule segmentation algorithms cannot entirely segment cavitary nodules, and the segmentation of juxta-vascular nodules is inaccurate and inefficient. To solve these problems, we propose a new method for the segmentation of lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise (DBSCAN). First, our method uses three-dimensional computed tomography image features of the average intensity projection combined with multi-scale dot enhancement for preprocessing. Hexagonal clustering and morphological optimized sequential linear iterative clustering (HMSLIC) for sequence image oversegmentation is then proposed to obtain superpixel blocks. The adaptive weight coefficient is then constructed to calculate the distance required between superpixels to achieve precise lung nodules positioning and to obtain the subsequent clustering starting block. Moreover, by fitting the distance and detecting the change in slope, an accurate clustering threshold is obtained. Thereafter, a fast DBSCAN superpixel sequence clustering algorithm, which is optimized by the strategy of only clustering the lung nodules and adaptive threshold, is then used to obtain lung nodule mask sequences. Finally, the lung nodule image sequences are obtained. The experimental results show that our method rapidly, completely and accurately segments various types of lung nodule image sequences. |
format | Online Article Text |
id | pubmed-5589176 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-55891762017-09-15 A segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise Zhang, Wei Zhang, Xiaolong Zhao, Juanjuan Qiang, Yan Tian, Qi Tang, Xiaoxian PLoS One Research Article The fast and accurate segmentation of lung nodule image sequences is the basis of subsequent processing and diagnostic analyses. However, previous research investigating nodule segmentation algorithms cannot entirely segment cavitary nodules, and the segmentation of juxta-vascular nodules is inaccurate and inefficient. To solve these problems, we propose a new method for the segmentation of lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise (DBSCAN). First, our method uses three-dimensional computed tomography image features of the average intensity projection combined with multi-scale dot enhancement for preprocessing. Hexagonal clustering and morphological optimized sequential linear iterative clustering (HMSLIC) for sequence image oversegmentation is then proposed to obtain superpixel blocks. The adaptive weight coefficient is then constructed to calculate the distance required between superpixels to achieve precise lung nodules positioning and to obtain the subsequent clustering starting block. Moreover, by fitting the distance and detecting the change in slope, an accurate clustering threshold is obtained. Thereafter, a fast DBSCAN superpixel sequence clustering algorithm, which is optimized by the strategy of only clustering the lung nodules and adaptive threshold, is then used to obtain lung nodule mask sequences. Finally, the lung nodule image sequences are obtained. The experimental results show that our method rapidly, completely and accurately segments various types of lung nodule image sequences. Public Library of Science 2017-09-07 /pmc/articles/PMC5589176/ /pubmed/28880916 http://dx.doi.org/10.1371/journal.pone.0184290 Text en © 2017 Zhang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Zhang, Wei Zhang, Xiaolong Zhao, Juanjuan Qiang, Yan Tian, Qi Tang, Xiaoxian A segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise |
title | A segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise |
title_full | A segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise |
title_fullStr | A segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise |
title_full_unstemmed | A segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise |
title_short | A segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise |
title_sort | segmentation method for lung nodule image sequences based on superpixels and density-based spatial clustering of applications with noise |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5589176/ https://www.ncbi.nlm.nih.gov/pubmed/28880916 http://dx.doi.org/10.1371/journal.pone.0184290 |
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