Cargando…
Identification of high-confidence RNA regulatory elements by combinatorial classification of RNA–protein binding sites
Crosslinking immunoprecipitation sequencing (CLIP-seq) technologies have enabled researchers to characterize transcriptome-wide binding sites of RNA-binding protein (RBP) with high resolution. We apply a soft-clustering method, RBPgroup, to various CLIP-seq datasets to group together RBPs that speci...
Autores principales: | Li, Yang Eric, Xiao, Mu, Shi, Binbin, Yang, Yu-Cheng T., Wang, Dong, Wang, Fei, Marcia, Marco, Lu, Zhi John |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5591525/ https://www.ncbi.nlm.nih.gov/pubmed/28886744 http://dx.doi.org/10.1186/s13059-017-1298-8 |
Ejemplares similares
-
Identification and dynamic quantification of regulatory elements using total RNA
por: Duttke, Sascha H., et al.
Publicado: (2019) -
REforge Associates Transcription Factor Binding Site Divergence in Regulatory Elements with Phenotypic Differences between Species
por: Langer, Björn E, et al.
Publicado: (2018) -
Profiling the long noncoding RNA interaction network in the regulatory elements of target genes by chromatin in situ reverse transcription sequencing
por: Zhang, Shilin, et al.
Publicado: (2019) -
FIPRESCI: droplet microfluidics based combinatorial indexing for massive-scale 5′-end single-cell RNA sequencing
por: Li, Yun, et al.
Publicado: (2023) -
Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts
por: Ay, Ferhat, et al.
Publicado: (2014)