Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS

The ability of micro-organisms to degrade isosaccharinic acids (ISAs) while tolerating hyperalkaline conditions is pivotal to our understanding of the biogeochemistry associated within these environs, but also in scenarios pertaining to the cementitious disposal of radioactive wastes. An alkalitoler...

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Detalles Bibliográficos
Autores principales: Rout, Simon P., Salah, Zohier B., Charles, Christopher J., Humphreys, Paul N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5591956/
https://www.ncbi.nlm.nih.gov/pubmed/28859355
http://dx.doi.org/10.1093/gbe/evx151
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author Rout, Simon P.
Salah, Zohier B.
Charles, Christopher J.
Humphreys, Paul N.
author_facet Rout, Simon P.
Salah, Zohier B.
Charles, Christopher J.
Humphreys, Paul N.
author_sort Rout, Simon P.
collection PubMed
description The ability of micro-organisms to degrade isosaccharinic acids (ISAs) while tolerating hyperalkaline conditions is pivotal to our understanding of the biogeochemistry associated within these environs, but also in scenarios pertaining to the cementitious disposal of radioactive wastes. An alkalitolerant, ISA degrading micro-organism was isolated from the hyperalkaline soils resulting from lime depositions. Here, we report the first whole-genome sequence, ISA degradation profile and carbohydrate preoteome of a Macellibacteroides fermentans strain HH-ZS, 4.08 Mb in size, coding 3,241 proteins, 64 tRNA, and 1 rRNA.
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spelling pubmed-55919562017-09-19 Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS Rout, Simon P. Salah, Zohier B. Charles, Christopher J. Humphreys, Paul N. Genome Biol Evol Genome Report The ability of micro-organisms to degrade isosaccharinic acids (ISAs) while tolerating hyperalkaline conditions is pivotal to our understanding of the biogeochemistry associated within these environs, but also in scenarios pertaining to the cementitious disposal of radioactive wastes. An alkalitolerant, ISA degrading micro-organism was isolated from the hyperalkaline soils resulting from lime depositions. Here, we report the first whole-genome sequence, ISA degradation profile and carbohydrate preoteome of a Macellibacteroides fermentans strain HH-ZS, 4.08 Mb in size, coding 3,241 proteins, 64 tRNA, and 1 rRNA. Oxford University Press 2017-08-16 /pmc/articles/PMC5591956/ /pubmed/28859355 http://dx.doi.org/10.1093/gbe/evx151 Text en © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Genome Report
Rout, Simon P.
Salah, Zohier B.
Charles, Christopher J.
Humphreys, Paul N.
Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS
title Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS
title_full Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS
title_fullStr Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS
title_full_unstemmed Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS
title_short Whole-Genome Sequence of the Anaerobic Isosaccharinic Acid Degrading Isolate, Macellibacteroides fermentans Strain HH-ZS
title_sort whole-genome sequence of the anaerobic isosaccharinic acid degrading isolate, macellibacteroides fermentans strain hh-zs
topic Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5591956/
https://www.ncbi.nlm.nih.gov/pubmed/28859355
http://dx.doi.org/10.1093/gbe/evx151
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