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Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs

Rbfox RNA-binding proteins play important roles in the regulation of alternative pre-mRNA splicing, but their role in other gene regulatory mechanisms is not well understood. Here, we show that Rbfox2 is a novel constituent of cytoplasmic stress granules, the translational silencing machinery assemb...

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Autores principales: Park, Chungoo, Choi, Sunkyung, Kim, Yong-Eun, Lee, Siyeo, Park, Su-Hyung, Adelstein, Robert S., Kawamoto, Sachiyo, Kim, Kee K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5593835/
https://www.ncbi.nlm.nih.gov/pubmed/28894257
http://dx.doi.org/10.1038/s41598-017-11651-w
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author Park, Chungoo
Choi, Sunkyung
Kim, Yong-Eun
Lee, Siyeo
Park, Su-Hyung
Adelstein, Robert S.
Kawamoto, Sachiyo
Kim, Kee K.
author_facet Park, Chungoo
Choi, Sunkyung
Kim, Yong-Eun
Lee, Siyeo
Park, Su-Hyung
Adelstein, Robert S.
Kawamoto, Sachiyo
Kim, Kee K.
author_sort Park, Chungoo
collection PubMed
description Rbfox RNA-binding proteins play important roles in the regulation of alternative pre-mRNA splicing, but their role in other gene regulatory mechanisms is not well understood. Here, we show that Rbfox2 is a novel constituent of cytoplasmic stress granules, the translational silencing machinery assembled in response to cellular stress. We also show that the RNA binding activity of the Rbfox family protein is crucial for its localization into stress granules. To investigate the role of Rbfox2 in stress granules we used RNA-immunoprecipitation sequencing to identify cytoplasmic transcriptome-wide targets of Rbfox2. We report that a subset of cell cycle-related genes including retinoblastoma 1 is the target of Rbfox2 in cytoplasmic stress granules, and Rbfox2 regulates the retinoblastoma 1 mRNA and protein expression levels during and following stress exposure. Our study proposes a novel function for Rbfox2 in cytoplasmic stress granules.
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spelling pubmed-55938352017-09-13 Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs Park, Chungoo Choi, Sunkyung Kim, Yong-Eun Lee, Siyeo Park, Su-Hyung Adelstein, Robert S. Kawamoto, Sachiyo Kim, Kee K. Sci Rep Article Rbfox RNA-binding proteins play important roles in the regulation of alternative pre-mRNA splicing, but their role in other gene regulatory mechanisms is not well understood. Here, we show that Rbfox2 is a novel constituent of cytoplasmic stress granules, the translational silencing machinery assembled in response to cellular stress. We also show that the RNA binding activity of the Rbfox family protein is crucial for its localization into stress granules. To investigate the role of Rbfox2 in stress granules we used RNA-immunoprecipitation sequencing to identify cytoplasmic transcriptome-wide targets of Rbfox2. We report that a subset of cell cycle-related genes including retinoblastoma 1 is the target of Rbfox2 in cytoplasmic stress granules, and Rbfox2 regulates the retinoblastoma 1 mRNA and protein expression levels during and following stress exposure. Our study proposes a novel function for Rbfox2 in cytoplasmic stress granules. Nature Publishing Group UK 2017-09-11 /pmc/articles/PMC5593835/ /pubmed/28894257 http://dx.doi.org/10.1038/s41598-017-11651-w Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Park, Chungoo
Choi, Sunkyung
Kim, Yong-Eun
Lee, Siyeo
Park, Su-Hyung
Adelstein, Robert S.
Kawamoto, Sachiyo
Kim, Kee K.
Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs
title Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs
title_full Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs
title_fullStr Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs
title_full_unstemmed Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs
title_short Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs
title_sort stress granules contain rbfox2 with cell cycle-related mrnas
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5593835/
https://www.ncbi.nlm.nih.gov/pubmed/28894257
http://dx.doi.org/10.1038/s41598-017-11651-w
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