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Intrachromosomal karyotype asymmetry in Orchidaceae
The asymmetry indexes have helped cytotaxonomists to interpret and classify plant karyotypes for species delimitation efforts. However, there is no consensus about the best method to calculate the intrachromosomal asymmetry. The present study aimed to compare different intrachromosomal asymmetry ind...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5596371/ https://www.ncbi.nlm.nih.gov/pubmed/28644507 http://dx.doi.org/10.1590/1678-4685-GMB-2016-0264 |
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author | Medeiros-Neto, Enoque Nollet, Felipe Moraes, Ana Paula Felix, Leonardo P. |
author_facet | Medeiros-Neto, Enoque Nollet, Felipe Moraes, Ana Paula Felix, Leonardo P. |
author_sort | Medeiros-Neto, Enoque |
collection | PubMed |
description | The asymmetry indexes have helped cytotaxonomists to interpret and classify plant karyotypes for species delimitation efforts. However, there is no consensus about the best method to calculate the intrachromosomal asymmetry. The present study aimed to compare different intrachromosomal asymmetry indexes in order to indicate which are more efficient for the estimation of asymmetry in different groups of orchids. Besides, we aimed to compare our results with the Orchidaceae phylogenetic proposal to test the hypothesis of Stebbins (1971). Through a literature review, karyotypes were selected and analyzed comparatively with ideal karyotypes in a cluster analysis. All karyotypes showed some level of interchromosomal asymmetry, ranging from slightly asymmetric to moderately asymmetric. The five tested intrachromosomal asymmetry indexes indicated Sarcoglottis grandiflora as the species with the most symmetrical karyotype and Christensonella pachyphylla with the most asymmetrical karyotype. In the cluster analysis, the largest number of species were grouped with the intermediary ideal karyotypes B or C. Considering our results, we recommend the combined use of at least two indexes, especially Ask% or A1 with Syi, for cytotaxonomic analysis in groups of orchids. In an evolutionary perspective, our results support Stebbins’ hypothesis that asymmetric karyotypes derive from a symmetric karyotypes. |
format | Online Article Text |
id | pubmed-5596371 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-55963712017-09-20 Intrachromosomal karyotype asymmetry in Orchidaceae Medeiros-Neto, Enoque Nollet, Felipe Moraes, Ana Paula Felix, Leonardo P. Genet Mol Biol Plant Genetics The asymmetry indexes have helped cytotaxonomists to interpret and classify plant karyotypes for species delimitation efforts. However, there is no consensus about the best method to calculate the intrachromosomal asymmetry. The present study aimed to compare different intrachromosomal asymmetry indexes in order to indicate which are more efficient for the estimation of asymmetry in different groups of orchids. Besides, we aimed to compare our results with the Orchidaceae phylogenetic proposal to test the hypothesis of Stebbins (1971). Through a literature review, karyotypes were selected and analyzed comparatively with ideal karyotypes in a cluster analysis. All karyotypes showed some level of interchromosomal asymmetry, ranging from slightly asymmetric to moderately asymmetric. The five tested intrachromosomal asymmetry indexes indicated Sarcoglottis grandiflora as the species with the most symmetrical karyotype and Christensonella pachyphylla with the most asymmetrical karyotype. In the cluster analysis, the largest number of species were grouped with the intermediary ideal karyotypes B or C. Considering our results, we recommend the combined use of at least two indexes, especially Ask% or A1 with Syi, for cytotaxonomic analysis in groups of orchids. In an evolutionary perspective, our results support Stebbins’ hypothesis that asymmetric karyotypes derive from a symmetric karyotypes. Sociedade Brasileira de Genética 2017-06-22 2017 /pmc/articles/PMC5596371/ /pubmed/28644507 http://dx.doi.org/10.1590/1678-4685-GMB-2016-0264 Text en Copyright © 2017, Sociedade Brasileira de Genética. http://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited. |
spellingShingle | Plant Genetics Medeiros-Neto, Enoque Nollet, Felipe Moraes, Ana Paula Felix, Leonardo P. Intrachromosomal karyotype asymmetry in Orchidaceae |
title | Intrachromosomal karyotype asymmetry in Orchidaceae |
title_full | Intrachromosomal karyotype asymmetry in Orchidaceae |
title_fullStr | Intrachromosomal karyotype asymmetry in Orchidaceae |
title_full_unstemmed | Intrachromosomal karyotype asymmetry in Orchidaceae |
title_short | Intrachromosomal karyotype asymmetry in Orchidaceae |
title_sort | intrachromosomal karyotype asymmetry in orchidaceae |
topic | Plant Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5596371/ https://www.ncbi.nlm.nih.gov/pubmed/28644507 http://dx.doi.org/10.1590/1678-4685-GMB-2016-0264 |
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